Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01389 ATGCCATTGATTCGCACTACTCCACCGCTTCCTTATGCCATTTCCACACTCACTAAACTTACCAATGCATCTCTATCATCATCTTCCACTCTTTCTGCTGCCACATTCGGTTCCCACCTCCTGCGTAAAATTCAGAACCCAATTATTGGGTTTTCCGCAACCAGGAATCGCTCGCGTGCTGCGCTGATCAGAGCCAAAGCAGGGGCCGATTACTATTCCACCTTGAACGTTAGCCCCAGCGCTTCGCTGCAAGAAATCAAGGCCTCCTATCGCAAGCTGGCGCGCAAGTACCATCCAGATATGAACAAAAGCCCTGGGGCTGAGGAGAAGTTCAAAGAAATAAGTGCTGCATATGAGGTCCTGTCAGATGAGGAGAAAAGATCTTTATATGATCGTTTTGGTGAGTCAGGTCTTCAAGAAGAAAATGGAGGGTCAAGTGGTGCTCCAGGGGTGGATCCTTTTGATTTATTTGATACATTCTTTGGTCGTTCTGATGGAATATTTAGAGAGGAAATGGGAAAGGGTCATTCAGGCAGACAAAGCTCGCTAGCTGCAAGAAAAAACTTGGTTATCCAATATGACCTTAATTTGAGCTTTGAAGAATCAATATTTGGAGCACAAAGGGAGATTGAAGTTTCCTGTTTTCAGACATGTGACACTTGTGATGGTACAGGAGCCAAATCAAAGAATTGCATTAAGCAATGCATAAATTGCGGTGGCAGAGGGGGAGAAATGAAAAGTCAGAGAACACCCTTTGGAATGATGTCTCAGGTTTCTACCTGCTCTAAGTGTAGTGGCCTTGGTAAAATAATCACAGATCACTGTCGAAGGTGTGATGGCAGTGGTCAGGTGCAATCCAAAGAAACAATCGAAGTGGACATTCCTGCTGGAGTCAATGATGGAGACACAATGCAAATTCAAGGACAAGGGAATTTTGATAAAAAGAGGCAAATTACTGGGGATCTTTTTGTTGTCCTGCATGTAGATGAAAAGCAAGGAATTTGGAGAGAGGGTCTTCATTTGTACTCAAAGATTAACATTGACTTCACAGATGCAATATTGGGGTCAGTTAAAAAGGTTGAAACAGTTGAAGGTTTACGGGATCTTCAAATTCCTTCAGGGATTCAACCTGGAGATTCAGTGAAGTTGTCACGTTTGGGAGTTCCAGACATGAATAAACCATTTGTCCGAGGCAATCATTACTTCATTGTGAATGTTCTTATTCCAAAGGATATCAGTGGCACACAACGTGTTCTTGTTGAGCAGTTAGCTTCACTAAGAGCTTCTAACAGAAGGGATTCACTGTCTTCGGGTGACAATGGAATACCTAAAGGAAAGTTCAATGAATTCACTAAGAGGAGGGATCCGAGGGGTGATGGTTCAAGCAAGGGAATAAAAAATGTTGACTCTCTATGGGGATCGATCAAGAACTTCTTAAGGTATATCCCAGTTGTGTGGAAGACAGTCCGATGA 1473 0.4318 MPLIRTTPPLPYAISTLTKLTNASLSSSSTLSAATFGSHLLRKIQNPIIGFSATRNRSRAALIRAKAGADYYSTLNVSPSASLQEIKASYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDEEKRSLYDRFGESGLQEENGGSSGAPGVDPFDLFDTFFGRSDGIFREEMGKGHSGRQSSLAARKNLVIQYDLNLSFEESIFGAQREIEVSCFQTCDTCDGTGAKSKNCIKQCINCGGRGGEMKSQRTPFGMMSQVSTCSKCSGLGKIITDHCRRCDGSGQVQSKETIEVDIPAGVNDGDTMQIQGQGNFDKKRQITGDLFVVLHVDEKQGIWREGLHLYSKINIDFTDAILGSVKKVETVEGLRDLQIPSGIQPGDSVKLSRLGVPDMNKPFVRGNHYFIVNVLIPKDISGTQRVLVEQLASLRASNRRDSLSSGDNGIPKGKFNEFTKRRDPRGDGSSKGIKNVDSLWGSIKNFLRYIPVVWKTVR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01389 490 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 328 IPR008971 GO:0006457|GO:0051082
Vian8g01389 490 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 205 285 IPR036410 -
Vian8g01389 490 Gene3D - 335 426 - -
Vian8g01389 490 Gene3D DnaJ domain 67 171 IPR036869 -
Vian8g01389 490 CDD DnaJ_C 191 412 - -
Vian8g01389 490 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Vian8g01389 490 MobiDBLite consensus disorder prediction 431 463 - -
Vian8g01389 490 Pfam DnaJ C terminal domain 191 409 IPR002939 -
Vian8g01389 490 Pfam DnaJ domain 70 131 IPR001623 -
Vian8g01389 490 Hamap Chaperone protein DnaJ [dnaJ]. 67 468 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Vian8g01389 490 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 417 IPR008971 GO:0006457|GO:0051082
Vian8g01389 490 FunFam Chaperone protein dnaJ A6 chloroplastic 67 173 - -
Vian8g01389 490 CDD DnaJ 70 123 IPR001623 -
Vian8g01389 490 ProSiteProfiles Zinc finger CR-type profile. 205 287 IPR001305 GO:0031072|GO:0051082
Vian8g01389 490 CDD DnaJ_zf 218 282 IPR001305 GO:0031072|GO:0051082
Vian8g01389 490 SMART dnaj_3 69 126 IPR001623 -
Vian8g01389 490 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 35 429 - -
Vian8g01389 490 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Vian8g01389 490 Pfam DnaJ central domain 218 282 IPR001305 GO:0031072|GO:0051082
Vian8g01389 490 Gene3D - 218 282 - -
Vian8g01389 490 Gene3D - 191 324 - -
Vian8g01389 490 MobiDBLite consensus disorder prediction 446 462 - -
Vian8g01389 490 SUPERFAMILY Chaperone J-domain 69 169 IPR036869 -
Vian8g01389 490 PRINTS DnaJ domain signature 72 90 IPR001623 -
Vian8g01389 490 PRINTS DnaJ domain signature 90 105 IPR001623 -
Vian8g01389 490 PRINTS DnaJ domain signature 126 145 IPR001623 -
Vian8g01389 490 PRINTS DnaJ domain signature 106 126 IPR001623 -
Vian8g01389 490 FunFam Molecular chaperone DnaJ 210 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01389 Vian-Chr8 33061659 33070811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01389 71 131 C2H2 Transcription Factor Family AT1G74250 43.284 1.04e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01389 K03686 - gmx:100782135 787.334