Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01380 ATGGAATCTGAGAGGCCTAACACTACTATTGAGACCTACGAACACCAACACCAACTACAACAAGAAGACGATGACGAGGAAGAAGAAGAAGAAGAAGAAAACAATGAGATCCTCAAGAGAAGAATCTCCAGCCACCCTCTCTATGGACTGCTGGTTGAAGCTCACCTCGACTGTTTGAAGGTCGGTGACATTTCCAACCTGCAGAGAGAGCTGAAGATAGATCAGATGCAAGCAACAGAGAAGCAAAACTTGGGCATGTTCAGCCAATCTGAGCTCGATCTCTTCATGGAAGCATATTGCTTGGCACTTGGGAAGCTTAAAGAAGCAATGGTGGAACCACAACAGAAGTCCATGGCTTTCATAAACAACATGCATTCTCAACTTAGAGAGATCACTAACCCAACTTTGCCTGCACCTTCTTCTGAGCCTGCACCACCTTCTGCTTCTTCTAGTCACTGCAAATTCTCAATAAATTAG 477 0.4465 MESERPNTTIETYEHQHQLQQEDDDEEEEEEEENNEILKRRISSHPLYGLLVEAHLDCLKVGDISNLQRELKIDQMQATEKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLREITNPTLPAPSSEPAPPSASSSHCKFSIN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01380 158 MobiDBLite consensus disorder prediction 1 20 - -
Vian8g01380 158 MobiDBLite consensus disorder prediction 1 36 - -
Vian8g01380 158 MobiDBLite consensus disorder prediction 132 158 - -
Vian8g01380 158 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 15 133 - -
Vian8g01380 158 SMART KNOX2_2 82 133 IPR005541 GO:0003677|GO:0005634
Vian8g01380 158 Pfam KNOX2 domain 90 132 IPR005541 GO:0003677|GO:0005634
Vian8g01380 158 Coils Coil 10 41 - -
Vian8g01380 158 SMART KNOX1_2 36 82 IPR005540 GO:0003677|GO:0005634
Vian8g01380 158 Pfam KNOX1 domain 38 62 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01380 Vian-Chr8 32951170 32953442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01380 36 128 Homeobox Transcription Factor Family AT4G08150 38.000 9.86e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01380 - - gmx:100805160 208.379