Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01377 ATGGCACTTGTCCGCCACCGCCGCCATCCTAATCTCCGCCTACCCCTCCCGGAGATCTCTGAGCGCCGCCCCCGCTTCCCTCTCCCCCTCCCTCCCACCGCCGCTAAACCCGCCGCCGGAGAAGGCATCACCGCCGCCGACCTCGAAAACCTCGCCGTGCTCGGCCACGGCAACGGCGGCACCGTCTACAAGGTCCGCCACAAGACAACCTCCGCCACCTACGCGCTCAAAATCATCCACAGCAACGCCGACGCCACCATGCGCCGCCGCGCGTTCTCGGAAACATCCATCCTCCGCCGTGCCACCGACTGCCCCCACGTCGTCCGCTTCCACGGCTCCTTCGAAAAGCCCTCCGGCGACGTCGCCATCCTCATGGAGTACATGGACGGCGGCACCCTCGAGACCGCCCTCGCCACCAGCGGCACGTTCTCAGAGGGAAGGCTTGCCGCGGTGGCGCGTGATATCCTCGAGGGCCTCGCGTGCCTCCACTCTCGCAACATCGCGCACCGCGACATCAAACCTGCGAACATCCTCGTAAACTCACAGGGAGAAGTTAAAATTGCAGACTTCGGAGTCAGCAAACTCATGTGCCGCACGCTCGAAGCCTGCAACTCTTATGTCGGCACGTGCGCGTACATGAGTCCGGAACGGTTCGACCCGGAAGCATCAGGCGGGAACTACAACGGTTTCGCTGCGGATATTTGGAGTTTGGGTTTGACCCTCTTTGAACTCTACGTGGGTCACTTCCCGTTTCTTGAAACGGGTCAGCGACCCGATTGGGCTACCCTAATATGTGCCATTTGTTACGGCGACCCCCCTAGCCTCCCCGAGACAGCGTCAGCTGAATTTCGCAGCTTCGTCGAATCCTGTCTCAAAAAGGACTCCGGTGATAGGTGGACGGCGGCACAACTCTTGACCCACCCGTTCGTGTGCAAAAACCCGGAAACTCACTAA 954 0.6132 MALVRHRRHPNLRLPLPEISERRPRFPLPLPPTAAKPAAGEGITAADLENLAVLGHGNGGTVYKVRHKTTSATYALKIIHSNADATMRRRAFSETSILRRATDCPHVVRFHGSFEKPSGDVAILMEYMDGGTLETALATSGTFSEGRLAAVARDILEGLACLHSRNIAHRDIKPANILVNSQGEVKIADFGVSKLMCRTLEACNSYVGTCAYMSPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLETGQRPDWATLICAICYGDPPSLPETASAEFRSFVESCLKKDSGDRWTAAQLLTHPFVCKNPETH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01377 317 Gene3D Phosphorylase Kinase; domain 1 39 123 - -
Vian8g01377 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Vian8g01377 317 FunFam Mitogen-activated protein kinase 2 130 317 - -
Vian8g01377 317 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 45 312 - -
Vian8g01377 317 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01377 317 SMART serkin_6 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01377 317 SUPERFAMILY Protein kinase-like (PK-like) 47 312 IPR011009 -
Vian8g01377 317 CDD PKc_MAPKK_plant_like 46 310 - -
Vian8g01377 317 ProSiteProfiles Protein kinase domain profile. 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g01377 317 Gene3D Transferase(Phosphotransferase) domain 1 124 317 - -
Vian8g01377 317 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Vian8g01377 317 FunFam Dual specificity mitogen-activated protein kinase kinase 36 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01377 Vian-Chr8 32910507 32911460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01377 1 310 MAP Kinase Kinase Gene Family AT1G73500 61.859 2.60e-129 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Vian8g01377 Pkinase 4.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01377 K20604 - gmx:100804100 563.533