Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01358 ATGGATCTTGATCAAAACCCAGAAGCTGAAATATTTGGGGAAGGTGGTTTTGCATTTTCATCATTTGGTGTTGTGATGGATGGTGATAATGGTCTCAACATCCGTAACTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCATCTGGGGCTGCAGCTGATGTCATCCATGCCGGAAAAGCCTTTAATCGGAGGGCGCAATGCTGCGGTTTTATCTGCTACAAATGGGGCATTTCACCACAGAGAGATTGGTATGTCCCACGCTACATACCCTATGGAATACGTGAGAGATGCTTGGATTAGTAGTCAGAGAGACAAGTATATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCAGAGACATCTTCGGCACATCAAATTCAAATGATTCCACCGCCGGAATTGCCGAAGGAAGAAAGGGAAGTGGAAGAGGAAGCTGTTGTTGAGAAGGCAACTGGGGGCAGTCGTAAGAAAAGACAGAGTCCTAAGGTGCCGAAATCTCCCAAGGCAAAGAAGTCCAAGAGGGGCCCTCGTGTGCCAAAGAATGAGAATGCTCCCACAGTTCATCGTGCAAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGAATAGACATGGATATTTCTAGTATTCCAATCCCTGTTTGTTCATGCACAGGAGCACCTCAACAGTGTTACAGATGGGGCTCTGGAGGGTGGCAATCTGCATGTTGCACAACAGGCATGTCAGTTTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTCAAGAAAGTTTTGGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCTATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 927 0.4466 MDLDQNPEAEIFGEGGFAFSSFGVVMDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSATNGAFHHREIGMSHATYPMEYVRDAWISSQRDKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEEREVEEEAVVEKATGGSRKKRQSPKVPKSPKAKKSKRGPRVPKNENAPTVHRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01358 308 MobiDBLite consensus disorder prediction 136 198 - -
Vian8g01358 308 MobiDBLite consensus disorder prediction 137 159 - -
Vian8g01358 308 MobiDBLite consensus disorder prediction 160 179 - -
Vian8g01358 308 SMART GAGA_bind_2 26 308 IPR010409 -
Vian8g01358 308 PANTHER - 26 308 IPR010409 -
Vian8g01358 308 Pfam GAGA binding protein-like family 26 308 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01358 Vian-Chr8 32709573 32710754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01358 26 308 BBR or BPC Transcription factor family AT2G01930 52.365 7.17e-97 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vian8g01358 GAGA_bind 3e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01358 - - gmx:100784091 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01358 8 32709573 32710754 Vian8g01358 8 32709573 32710754 ECH