Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01357 ATGGATGGTGATAATGGTCTCAACATCCGTAACTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCGGAAAAGCCATTAATCGGAGGGCGCAATGCTGCGGTTTTATCTGGCACAAATGGGGCATTTCACCACAGAGACATTGGTATGTCCCACGCGACATACCCTATGGAATACACGAGAGATGCTTGGATTAGTAGTTACAGGGACAAGTATATGAATATGATACCTACAAGTCATAACTATGGTGGTATTCCAGAGACATCTTCGGCACATCAAATTCAAATGATTCCACCGCCGGAATTGCCGAAGGAAGAAAGGGAAGTGGAAGAGGAAGCTGTTGTTGAGAAGGCAACTGGGGGCAGTCGTAAGAAAAGACAGAGTCCTAAGGTGCCGAAATCTCCCAAGGCAAAGAAGTCCAAGAGGGGCCCTCGTGTGCCAAAGAATGAGAATGCTCCCACAGTTCATCGTGCAAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGAATAGACATGGATATTTCTAGTATTCCAATCCCTGTTTGTTCATGCACAGGAGCACCTCAACAGTGTTACAGATGGGGCTCTGGAGGGTGGCAATCTGCATGTTGCACAACAGGCATGTCAGTTTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTCAAGAAAGTTTTGGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCTATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 852 0.4566 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGTNGAFHHRDIGMSHATYPMEYTRDAWISSYRDKYMNMIPTSHNYGGIPETSSAHQIQMIPPPELPKEEREVEEEAVVEKATGGSRKKRQSPKVPKSPKAKKSKRGPRVPKNENAPTVHRARVPKKTTEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01357 283 MobiDBLite consensus disorder prediction 135 154 - -
Vian8g01357 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Vian8g01357 283 MobiDBLite consensus disorder prediction 112 134 - -
Vian8g01357 283 MobiDBLite consensus disorder prediction 111 173 - -
Vian8g01357 283 PANTHER - 1 283 IPR010409 -
Vian8g01357 283 SMART GAGA_bind_2 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01357 Vian-Chr8 32703164 32704015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01357 1 283 BBR or BPC Transcription factor family AT2G01930 52.703 7.11e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vian8g01357 GAGA_bind 8.7e-110 No_clan