Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01334 ATGTTGTTGGATCCTGGTGGTACCTCTTCAGTTTACAGGTGCACAAAATTCATTGATTGTGGACATGGAATAACTGAAGCATATCAACTTAACAATAGTTGGCATAATTGGAGGAACAATACTTTTGCAAATGCTTGTTTTACTGAAGATGGTTTTCGTGATGGTTATGGTATCTTTATTAAAGCTGTCAACCTTACCGCGCATCCTAATCTATCTACTAGATATTTCTATTCATCATTTTGGGGATTTCAGCAAATTAGTACACTGACTGGGAATTTAATCCCTAGCTATTTTGTTCCCGAAATCCTTTTTACTAAGGCCATTCTTGCGTCAGGACTGTTGCTGTTTGCTCTTCTCATTGGAAACATACAGAATATTCTTCAGGCTCTTGGACGCAGGAAGCTAGAGATGTCACTTAGGCGACGTGATGTTGAGCAATGGATGAGCCACCGGCGCTTAGGAGATGATCTAAGAAGGAGAGTGCGACAGGCTGAACGATATAACTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGCTCCTGGAGAATTTGCCAGAAGACCTCCAAAGGGAAATTAGACGTCATCTCTTCACATTTATTAAGAAAGTTCGAATTTTTGCCTTACTGGATGAGCCTATCTTGGATGCCATATGTGAGAGGCTAAGGCAGAAAACATATATCAAAGGAAGCAAAATTTTGTATGATTGTGGTTTGGTAGAGAAGATGGTTTTTATTGTGCGTGGAAAATTGGAGAGCGTTGGCGAAGATGGAATCAGTGCTCCCCTTTATGAAGGGAGTGTCTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATTCCTTAGCAAGCAAAGGTTGCAGAAAAGCAAGGATTCCAAGGCAAAAGCTGGTTAGTAACAGAAGAGTAATATGCTTAACAAATGTGGAGGCATTTTCCCTTAGAGCAGCAGACCTTGAAGAAGTTACAGGCCTATTTGCAAGATTCTTTAGGAATCCCCGTGTTCAAGGAGCCATAAGGTATGAATCACCTTATTGGAGATGCTTTGCAGCAACAAGCATTCAGGTTGCATGGAAATACAGAATGAAATGTCTCCGTCGTGCTAAAACTACATAA 1113 0.4124 MLLDPGGTSSVYRCTKFIDCGHGITEAYQLNNSWHNWRNNTFANACFTEDGFRDGYGIFIKAVNLTAHPNLSTRYFYSSFWGFQQISTLTGNLIPSYFVPEILFTKAILASGLLLFALLIGNIQNILQALGRRKLEMSLRRRDVEQWMSHRRLGDDLRRRVRQAERYNWAATRGVNEEMLLENLPEDLQREIRRHLFTFIKKVRIFALLDEPILDAICERLRQKTYIKGSKILYDCGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHSLASKGCRKARIPRQKLVSNRRVICLTNVEAFSLRAADLEEVTGLFARFFRNPRVQGAIRYESPYWRCFAATSIQVAWKYRMKCLRRAKTT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01334 370 Gene3D Jelly Rolls 203 327 IPR014710 -
Vian8g01334 370 Pfam Ion transport protein 34 133 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vian8g01334 370 CDD CAP_ED 205 321 IPR000595 -
Vian8g01334 370 Gene3D Helix hairpin bin 133 197 - -
Vian8g01334 370 ProSiteProfiles cAMP/cGMP binding motif profile. 205 273 IPR000595 -
Vian8g01334 370 SUPERFAMILY Voltage-gated potassium channels 66 167 - -
Vian8g01334 370 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 14 362 - -
Vian8g01334 370 SUPERFAMILY cAMP-binding domain-like 133 329 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01334 Vian-Chr8 32417556 32421106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01334 14 285 Ion Channels AT3G17700 68.750 4.77e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01334 K05391 - gmx:100795955 598.586