Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01332 ATGGCTAGTTTTGAAAATGATGAGCTGCAGAAGATACCAGAAGAAACTGATGCACAACCATATCATGAAACTTTGCATTCTAAATTTCAAAGGCTTTTATCCGGGAAACAAAGTGCATCAGTTTCTATTCCCATGGAGTCATATGAGGTAGAAACTAGTATCGTGGGAGATAGCGGTTCATTATATGCTACATCAGAAAGTGATAATCTTATGCAGCATAGTATAGTTGTAACAGGAAACATAGCACAGGAGAGCACAGATGAATTTTCTATTGTTGACAGCACGGCTTCAAAGTACTGGCATAAAAGCTATGATAGCATAAATGAACATTTACTGAGATCTGGGAAACTGGGAATTTGTAATGATCCTTATTGTACTACTTGTCCTTCTTACTTCAAGTCTTCTCGGCTAAGAAATCCAAAAGCTTGTAATATACCTGATCCGAAGTTTCAGAATGCTCTTAATGGGGATGCCAAAGTATTTGCAAGAAAATTTTGTTCTCTGTGTTCATCTTTTGTTCCTGGAGTTATGAATCCTCACTCTAAATTCATACAACAATGGAACAAGGTTCTTGCCAGTTTTTGCTTGGTTGCAATTTTTGTGGATCCATTATTTTTCTTCTTACTCTATGTTCGGCAGTTTAGGTTGGCTTTTGTTTCTCCTGAGTCGAGGGTGGTTGGTGCTGGAGATTTAGTTGATCATCCAAAAGAAATTGCATTTCATTACCTTAAGGGTTATTTTCTTGTTGACTTGTTTGTTGTATTTCCTCTTCCTCAGAGGGTTAATCAATGTTTTCGAAATGCGTGCCAAAGTTCTCATATCCCTGGATGCCTGGCATTCATTGATTGTGGACATAGCCATGTTGGGGACAATCGGCTTGGCTTATCATCAAACCAGTGGAACAACAATGCAGATGCTATTGCATGTTGGAATTCCTCTTCCAGCGGTTCTTTTTCTTATGGGATTTATAACAATGCTGTACCTCTTACTACACAAGCAGACATCGTCACCAAATACATATATGCTCTATTTTGGGGATTACAGCAAATCAGTACTCTGGCTGGTAACCAAACACCAAGCGACTTTGTGTTTGAAACCCTTTTTACTATAGCCATCATAGGATTGGGACTTTTTCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAAGGTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGACGCGGTGATGTTGAGCAATGGATGAGTCATAGGCGCTTGCCAGAATACCTCAGAAGGAGAGTACGACAGGCTGAACGGTATAGTTGGACTGCAACAAGGGGGGTGAATGAAGCAACGCTAATGGAGAATTTTCCAGAAGACCTCCAAGTGGATATAAGACGCCATCTCTTCAAATTTGTTAAGAGAGTTCGAATATTTGCTCTGATGGATGAACCTATCCTAGATGCCATTTGTGCGAGACTGAGACAAACTACTTGCATTAAAGGAAGTAGAATTTTGAGTCAAGGTAGTGTGGTAGAGAAGATGGTATTCGTGGTGCGTGGTAAATTGGAGAGTATAGGAGAAGATGGTACTAGAATTCCTTTATCTGAAGGGGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCACTCTTCTGTCAGCGCAGGTATGAATCACCTTATTGGAGATCCCTTGCAGCAATCCGCATTCAGGTTGCATGGAGATACAGAAAGAAACGCTTAA 1722 0.4024 MASFENDELQKIPEETDAQPYHETLHSKFQRLLSGKQSASVSIPMESYEVETSIVGDSGSLYATSESDNLMQHSIVVTGNIAQESTDEFSIVDSTASKYWHKSYDSINEHLLRSGKLGICNDPYCTTCPSYFKSSRLRNPKACNIPDPKFQNALNGDAKVFARKFCSLCSSFVPGVMNPHSKFIQQWNKVLASFCLVAIFVDPLFFFLLYVRQFRLAFVSPESRVVGAGDLVDHPKEIAFHYLKGYFLVDLFVVFPLPQRVNQCFRNACQSSHIPGCLAFIDCGHSHVGDNRLGLSSNQWNNNADAIACWNSSSSGSFSYGIYNNAVPLTTQADIVTKYIYALFWGLQQISTLAGNQTPSDFVFETLFTIAIIGLGLFLFALLIGNIQNFLQGLGRRRLEMQLRRGDVEQWMSHRRLPEYLRRRVRQAERYSWTATRGVNEATLMENFPEDLQVDIRRHLFKFVKRVRIFALMDEPILDAICARLRQTTCIKGSRILSQGSVVEKMVFVVRGKLESIGEDGTRIPLSEGDVCGEELLTWYLEHSSVSAGMNHLIGDPLQQSAFRLHGDTERNA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01332 573 MobiDBLite consensus disorder prediction 1 20 - -
Vian8g01332 573 CDD CAP_ED 469 548 IPR000595 -
Vian8g01332 573 Gene3D Jelly Rolls 467 570 IPR014710 -
Vian8g01332 573 SUPERFAMILY Voltage-gated potassium channels 179 397 - -
Vian8g01332 573 ProSiteProfiles cAMP/cGMP binding motif profile. 469 537 IPR000595 -
Vian8g01332 573 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 212 259 - -
Vian8g01332 573 SUPERFAMILY cAMP-binding domain-like 397 537 IPR018490 -
Vian8g01332 573 Gene3D Helix hairpin bin 396 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01332 Vian-Chr8 32392787 32398427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01332 5 549 Ion Channels AT3G17700 44.822 1.26e-159 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01332 K05391 - vum:124839418 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01332 8 32392787 32398427 Vian8g01332 8 32392787 32398427 ECH