Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01305 ATGAAAAACCTTAAAATACTGATCATTAGAAATGGTAAATTTTCCAAAGGTCCCAATTATTTTCCGGAAAGTTTGAGAGTATTGGAGTGGCATGGATACCCTTCAAATTGTTTACCATCAAATTTTGATCCGAACAAACTTGTGACGTGCAAGTTACTTCACAGTCATTTTACCTCATTTGGATTCCTTGGCTCATCAAAGAAGTTCGAAAATCTAACTGTCTTGAATTTTGACTGGTGCATATTTTTAACACAGACACCCGATATGTCTGATCTCGGAAATTTGGAGGAAGTTTCATTTAAAGGCTGTGAGAGTTTAGTTGAAGTTCACGACTCAGTTGGTTTTATGAATAAACTGAAAATATTGAATGCGGAAGGATGCATCAAGCTTATGAGTTTTCCACCTCTCAACTTGCCTACTCTTGAAAGACTAGAACTTTCGTTTTGTTTCAGTCTTGAGAAATTTCCAGAAATACTAGGAAAGATGGGAAACATAAGGGTACTTCAATTGCAAGATCTTCCCATTAAAGAATTGCCACTGTCGTTTCAAAATCTTGATGGACTCGAAGAGTTATCCTTGCCATGTGAAAATGTTCACTTTTCAAGTAGCATTGCCACGATGCCTAAATTGTTTCGTTTTAGTGTTACTAATTGCAGGGGGTGGCAATGGGTAAAATCAGAAGATGCTGAAGATAACTTAGGCTCAATGGTTCCTTCAAAGGTAGAATGGTTTGCCGCCTGGTCTTGCAACCTGGATGATGATTTCTTTTCAGGAGGTTTGATGCGGTTGGCACATGTGCGTTGTTTATTTCTACGGGACAATAATTTCAAACACCTTCCTGAATGCATCAAAGAATTTCACAACCTCTGGGCTCTTGATGTGAGTCATTGCAAACATCTTGAGGAAATCAGAGGGTTTCCACCAAAATTAGAACATTTCAAGGCAATAAACTGTATATCCTTGACTTCCTCCAGCTTAAGCATGTTGCTAAATAAGGAACTGCACGAAGCTAGAAAAACTGAGTTCTGGTTTCCAGGAGCAAGTTTTCCAGAGTGGTTTGATCTGAAGAGCAGTGGACCTTCATGTTCTTTCTGGTTTCGTAACAAGTTTCCTGCCAGAGTTCTTTCTCTTCTTATTGCACCTGTGGGTGATGATGAAGATGGGTTTAGTTTGATTAGACCTATGGTGTTCATTAATGGGAAAGTTCAACCAAGACCGTTTTATTTCAAGAAAATAGAGAGGATGATTGAATTCGATCACTCATACCTCTTTGATCTACAAACGATACCTATGTATAGTAATTTGTTTGAACTACCTTTAGAAAAGGAATGGAAACATGTGAAGGTTACATACGAAGGTGTCATAGAGACCTCAATTGTTAGAGCAACAGGAATTCATATATTCAAAGAGGGAAACAGCGAAGACATTCGGTTTGATGATCCTTATACCAACAATAAATTAGACAAAGATCTCAACTCTTCTCAATCAGAAAACCACTTGTTAAGAACCATAGGTTTCTTCACGTGCAAATTTTTCATAGGCCTTTTTCTTTTTCTTTTCTTGCTTTTATTTTTTACTTTATTTACCAGCCTCGGCACCAATCCAACTAGGGTATGA 1617 0.3772 MKNLKILIIRNGKFSKGPNYFPESLRVLEWHGYPSNCLPSNFDPNKLVTCKLLHSHFTSFGFLGSSKKFENLTVLNFDWCIFLTQTPDMSDLGNLEEVSFKGCESLVEVHDSVGFMNKLKILNAEGCIKLMSFPPLNLPTLERLELSFCFSLEKFPEILGKMGNIRVLQLQDLPIKELPLSFQNLDGLEELSLPCENVHFSSSIATMPKLFRFSVTNCRGWQWVKSEDAEDNLGSMVPSKVEWFAAWSCNLDDDFFSGGLMRLAHVRCLFLRDNNFKHLPECIKEFHNLWALDVSHCKHLEEIRGFPPKLEHFKAINCISLTSSSLSMLLNKELHEARKTEFWFPGASFPEWFDLKSSGPSCSFWFRNKFPARVLSLLIAPVGDDEDGFSLIRPMVFINGKVQPRPFYFKKIERMIEFDHSYLFDLQTIPMYSNLFELPLEKEWKHVKVTYEGVIETSIVRATGIHIFKEGNSEDIRFDDPYTNNKLDKDLNSSQSENHLLRTIGFFTCKFFIGLFLFLFLLLFFTLFTSLGTNPTRV 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01305 538 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 320 IPR044974 GO:0006952
Vian8g01305 538 Gene3D Ribonuclease Inhibitor 1 342 IPR032675 -
Vian8g01305 538 SUPERFAMILY L domain-like 2 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01305 Vian-Chr8 32005652 32007452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01305 14 193 WRKY Transcription Factor Family AT4G12020 35.294 2.10e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01305 - - var:108344036 1049.65