Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian8g01304 | ATGATAGGGATCCATGGAATGGGTGGGTTAGGGAAAACAACACTCTCTCTAGTAGTTTATAATTCGATTGCTGCTTATTTTGATGAATCATGTTTTCTTCAAAATGTAAGAAAAAATTCAAACAAAAATAGGTTACATCTCCTCCAAAGCATCTTTCTTTCAAAAATGCTTAGTGAGAAGAATATCATCTTAACAAGTTGGCAAGAAGGAGCATCAATGATACAGCAGAGGCTGGGGCGAAAGAAGGTTCTCTTGATTCTAGATGATGTTGACGACAGAGAGCAGTTACAAGCATTTGCTGGAAGAGCTGATTGGTTTGGTCCCGGCAGCAGGGTTATCATTACCACTCGGGACGAACAGCTGCTAAAATCTCATGGGATTAAAAGAACTTATGAGATGGAGGCATTGAATTTTGATGATTCTCTTCAATTGCTTATATGGAATGCTTTCGAAAGGGAAAAAGTTGATCCAAGTTACGAGGACGTGTTGAAACGTGTAGTAACTTATGCTTCTGGTCTTCCATTGGCTTTAAAAGTAATAGGTTCCAACTTGTATAGCAAAAGTGTAGAAGAATGGGAGTCTGCGATTGAACATTACAAAAGAATTCCAAACGGTGAAATTCTAGAGATACTTAAAGTAAGCTACGTTGCTTTGGGGGAAGAAGAAAAAAGCGTCTTTCTTGACATCGCCTGTTTCTTTAATGAAAGTAGTTTGGAAGAAGTTGAAAATATACTTGATGTTCTTTATGATAACGACATGAAACATCATATTGGGGTGTTGGTGGATAAATCTCTCATAGGTTTTTGGAGGGATGGAGAAGATTATATTGATATGCACGACTTGATTGAGGACATGGGTAGACATATTGAATGGCAAAAGTCACCCGAAGAGCCAGGGAAGCGCAGGAGATTATGGTTAAAGAAAGATATCCTTCATGTTTTAAAACACGACAAGGGTACTAGCAAAACTGAAATCATAATCCTGGATTTCGATTGGTCTATATATGAGCGAGAAAAAACGGTAGAATGGAATCCCAACGCCTTCAGAAGAATGAAAAACCTTAAAATACTTATCATTAGAGATGGTAAATTTTCCAAAGGTCCCAATTATTTTCCGGAAAGTTTGAGAGTACTGGAATGGCATGGATACCCTTCAAATTCTTTACCATCAAATTTTGATCCGAGCAATCTTGTGACATGCAAGCTACCTCACAGTCATTTTACGTCATTTGAATTCCTTGACTCATCAAAGAAGTTCGAGAATCTATCTGTCTTGAATTTTGACTGCTGCAAATTTTTGACAAAGATACCAGATATGTCTGATTTCGTAAATTTGGAGGAAGTTTCATTTAACAGGTGTGAGAGTTTAGTTGCAGTTCACGACTCAATTGGTTTAATGAGTAAACTTAAAATATTGCAGGCGGAACATTGCATCAAGCTTACGAATTTTCCACCTCTCAACTTGCCCACTCTTGAAAGCCTAAAACTTTCATTTTGTTCCAGTCTTGAGAAATTTCCAGAAATACTAGAAAAGATGGAAAACATAAGGAAACTTGTATTGGAGAAGCTTCCCATTAAAGAATTGCCACTGTCGTTTCAAAATCTTATTGGACTCGAAGAGTTATTCTTGTCATCATGTAAAATTGTTCACTTGCCTAACTTGTCTACTTTGAGTGTTACTGAAGATAACGGAGGCTCAATGGTTCCTTCAAAGTTAGAGTGTTTTTCAGCACAGTCTTGCAACCTGAATGATAACTTCTTTTCGGCAGGTTTCATGCAGTTGGCACAAGTGCGTATTTTAAGTCTACGGGACAATAATTTCAAACACCTTCCTGAATGCATCAAAGAATTTCACAACCTCAACGAGCTTGATGTGAGTTATTGCAAACATCTTGAGGAAATAAGAGGGTTTCCACCAAAATTAGAACATTTCACTGCAACAAACTGTATATCTTTGACTTCCACCAGCTTAGACATGTTGCTAAATAAGGAACTATACGAATCTAGAAAATCTTGGTTCTGGTTTCCAGGAGCAAGGTTTCCAGAGTGGTTTGATCTCAAGAGCAGTGGACCTTCATGTTCTTTCTGGTTTCGTAATAAGTTTCCTGCCAGAGTTCTTTCTCTTCTTATTATACATATGAATAAAAATGATAACTTAAGTATCTTTTACCCTGCTGTGTACATTAATGGGAAATCTCAAACAGACGCAAGCATGTATTTGATGGAGCAGACGAAATTTGAATTCGATCTAACATACTTCTCTGATCTAAAAATGTATGGTAATTTGCATGAACAACCTTCAGAAAAGGAATGGAATCACGTGAAGGTTAAATATAATATTTCTATAGGTGCCTCTATAGTTAAAGCAACAGGAATCCATGTATTCGAGGAAAACAAGAAAGACATTCGGTTTGATGATCCTTATATCATGGAAGATATCATGGAAGAAGAAGAAAAGAGGAAGAAAAGGAAGAAGGAGAAGAAGAAGAGGAAGAAAAAGAAGAAAAGGCAGAAGAAGAAGAAAATAGCATCATGGAAGACACCATGGAAGAAGAAGGAAGAAGAGGAAAAAGAAGAAAACTGCATCAGGAATCCATGTATTCAAAGAGGAAAACAGCATCATGGAAGCAATTCGGTTTGA | 2640 | 0.3708 | MIGIHGMGGLGKTTLSLVVYNSIAAYFDESCFLQNVRKNSNKNRLHLLQSIFLSKMLSEKNIILTSWQEGASMIQQRLGRKKVLLILDDVDDREQLQAFAGRADWFGPGSRVIITTRDEQLLKSHGIKRTYEMEALNFDDSLQLLIWNAFEREKVDPSYEDVLKRVVTYASGLPLALKVIGSNLYSKSVEEWESAIEHYKRIPNGEILEILKVSYVALGEEEKSVFLDIACFFNESSLEEVENILDVLYDNDMKHHIGVLVDKSLIGFWRDGEDYIDMHDLIEDMGRHIEWQKSPEEPGKRRRLWLKKDILHVLKHDKGTSKTEIIILDFDWSIYEREKTVEWNPNAFRRMKNLKILIIRDGKFSKGPNYFPESLRVLEWHGYPSNSLPSNFDPSNLVTCKLPHSHFTSFEFLDSSKKFENLSVLNFDCCKFLTKIPDMSDFVNLEEVSFNRCESLVAVHDSIGLMSKLKILQAEHCIKLTNFPPLNLPTLESLKLSFCSSLEKFPEILEKMENIRKLVLEKLPIKELPLSFQNLIGLEELFLSSCKIVHLPNLSTLSVTEDNGGSMVPSKLECFSAQSCNLNDNFFSAGFMQLAQVRILSLRDNNFKHLPECIKEFHNLNELDVSYCKHLEEIRGFPPKLEHFTATNCISLTSTSLDMLLNKELYESRKSWFWFPGARFPEWFDLKSSGPSCSFWFRNKFPARVLSLLIIHMNKNDNLSIFYPAVYINGKSQTDASMYLMEQTKFEFDLTYFSDLKMYGNLHEQPSEKEWNHVKVKYNISIGASIVKATGIHVFEENKKDIRFDDPYIMEDIMEEEEKRKKRKKEKKKRKKKKKRQKKKKIASWKTPWKKKEEEEKEENCIRNPCIQRGKQHHGSNSV | 879 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian8g01304 | 879 | Gene3D | - | 1 | 129 | IPR027417 | - | |
Vian8g01304 | 879 | SUPERFAMILY | "Winged helix" DNA-binding domain | 206 | 315 | IPR036390 | - | |
Vian8g01304 | 879 | Gene3D | Ribonuclease Inhibitor | 510 | 663 | IPR032675 | - | |
Vian8g01304 | 879 | Gene3D | - | 135 | 219 | IPR042197 | - | |
Vian8g01304 | 879 | Coils | Coil | 810 | 841 | - | - | |
Vian8g01304 | 879 | MobiDBLite | consensus disorder prediction | 847 | 864 | - | - | |
Vian8g01304 | 879 | SUPERFAMILY | L domain-like | 339 | 666 | - | - | |
Vian8g01304 | 879 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 229 | IPR027417 | - | |
Vian8g01304 | 879 | PRINTS | Disease resistance protein signature | 77 | 91 | - | - | |
Vian8g01304 | 879 | PRINTS | Disease resistance protein signature | 170 | 184 | - | - | |
Vian8g01304 | 879 | PRINTS | Disease resistance protein signature | 1 | 15 | - | - | |
Vian8g01304 | 879 | PRINTS | Disease resistance protein signature | 486 | 502 | - | - | |
Vian8g01304 | 879 | ProSiteProfiles | Leucine-rich repeat profile. | 537 | 558 | IPR001611 | GO:0005515 | |
Vian8g01304 | 879 | Pfam | NB-ARC domain | 2 | 201 | IPR002182 | GO:0043531 | |
Vian8g01304 | 879 | MobiDBLite | consensus disorder prediction | 817 | 879 | - | - | |
Vian8g01304 | 879 | Gene3D | Ribonuclease Inhibitor | 340 | 509 | IPR032675 | - | |
Vian8g01304 | 879 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 1 | 649 | IPR044974 | GO:0006952 | |
Vian8g01304 | 879 | MobiDBLite | consensus disorder prediction | 823 | 846 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian8g01304 | Vian-Chr8 | 31995768 | 31998748 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian8g01304 | 2 | 623 | WRKY Transcription Factor Family | AT4G12020 | 32.344 | 1.41e-74 | 265 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian8g01304 | - | - | vra:106763192 | 1281.93 |