Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01282 ATGGGTAGACAAATTGACCAACATGAATCACCTAAAGAGCCAGGAAAACACAAGAGGCTATGGTTACCAAAAGATATAATTCAAGTTTTAAAATACAACACGGGAATTGATATCATCTGTCTAGATATCTCCATATCTAAGAGAGAAGAAACGATATACTGGAATAGAAATGCCTTCAGAAAGATGAAAAAGCTTAAAATACTTATCATAAGAAATGGTAAATTTTCTGAAGGTCCCAATTATTTTCCAGAAAGTTTGAGAGTACTGGAATGGCATGGATACCCTTCAAATTGTTTACCATCAAATTTTGATCCGAGAAAACTTGTGATATGCAAGTTACCTCACAGTCCTTTTACGTCATTTGGGTTTCATGGTTCATCAAAGAAGTTGGAGAATCTAACCGTCTTGAATTTTGACAAGTGCAATTATTTAACGCAGATACCTAACTTGTCTGATCTCTTAAATTTGGAAGTACTTTCATTTAAAAAGTGTGGGAGTTTAATAGTAGTTCACGACTCAATTGGTTTTCTGAATAAACTTAAAATATTGAAATCTAAAGGTTGCAAGAAGCTTAGGAGATTTCCACCTCTCAACTTGACCTCTCTTGAACAACTTGAACTTTCATATTGTTCAAGTCTTGAGAATTTTCCAGAAATATTAGGAAAGATGGGAAACATAAGGAAACTTAGTTTGTTTGAACTTCCCATAAAAAACTTGCCTGTTTCATTTCATAATCTTACTGGACTACAAGAATTAGAGATGAGCTGTGATTTTGTTCAGTTAAGTAGCACTGTCTTGACGCCTGAACTGTCTGATTTTAGAGTTCATAAAGGCAAGGGGTGGCAATGGGTAAAATCACAAGAGGGTGAGGAAAAAGTGGGTTCAATGGTATCTCCAAAGATACATATGTTTTGGGTTTTATGTTGCAACTTGAATGATGATTTTTTTTCAGCAAGTTTCAAGCAGTTAGCTCAAGTGAGTCATTTAAGGCTAAGGGAAAGTAATGTCACATTCCTTCCTGAATGCATCAAAGAATTTCACGGCCTATATTCTCTCGATGTGAATGATTGCAAGCATATTCAGGAAATTAGAGGGGTTCCACCAAACTTGAAATATTTCAGGGCAATAAACTGTATATCCTTGACTTCCACGGGTTCAAGCATGCTGTTAAATCAGCAGCTTCACGAGGCTGGAGGGACTGATTTTATCTTTCCAGGAGGAAGTATTCCACAGTGGTTCCATAAACAGAGGAAGGAACCTTCAATTTCTTTCTGGTTTCGAAATAAATTCCCTGCCAAAGTTCTTTGTCTTCTTATTGCACCTGTACTGGGTGATAACGTGACAGGATTGGTTAGATACATTATGTTCATCAATGGCAGAGTTAGAAAACAATATTTGTTACATTATCTGAACAGACAAGTGAAGATGTTGGAATCAGATTATACACATCTCTTTGATCTACAACACTCACATTTCTCCACTGATGATGATCTGATGGAAGAAGTGTCTTTAGAAAAGGAATGGAATCAGGTGACGATTACATATGAAGGTTTGATAGAGAGTTCCCTCATTAAAATAATCGGAATCCATGTTGTAAAAGAGGAAAACAGCAGCATGGAGGACATTCGATATGATGATCCTTATGCAAACACAAAAGAAGACAATCACCTCAACACTTCCCAATCACAACCCTTTCTTAAAATACAGACAGGTTTAATGTTGACATGCAAGTTTTTTATAGGTTCCTTTATGTTGTTCTCTTGCTTTTTATTATTAATTTTATCTAACCTCACAAACAACCCAACCTGA 1809 0.3588 MGRQIDQHESPKEPGKHKRLWLPKDIIQVLKYNTGIDIICLDISISKREETIYWNRNAFRKMKKLKILIIRNGKFSEGPNYFPESLRVLEWHGYPSNCLPSNFDPRKLVICKLPHSPFTSFGFHGSSKKLENLTVLNFDKCNYLTQIPNLSDLLNLEVLSFKKCGSLIVVHDSIGFLNKLKILKSKGCKKLRRFPPLNLTSLEQLELSYCSSLENFPEILGKMGNIRKLSLFELPIKNLPVSFHNLTGLQELEMSCDFVQLSSTVLTPELSDFRVHKGKGWQWVKSQEGEEKVGSMVSPKIHMFWVLCCNLNDDFFSASFKQLAQVSHLRLRESNVTFLPECIKEFHGLYSLDVNDCKHIQEIRGVPPNLKYFRAINCISLTSTGSSMLLNQQLHEAGGTDFIFPGGSIPQWFHKQRKEPSISFWFRNKFPAKVLCLLIAPVLGDNVTGLVRYIMFINGRVRKQYLLHYLNRQVKMLESDYTHLFDLQHSHFSTDDDLMEEVSLEKEWNQVTITYEGLIESSLIKIIGIHVVKEENSSMEDIRYDDPYANTKEDNHLNTSQSQPFLKIQTGLMLTCKFFIGSFMLFSCFLLLILSNLTNNPT 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01282 602 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
Vian8g01282 602 Gene3D Ribonuclease Inhibitor 41 197 IPR032675 -
Vian8g01282 602 Gene3D Ribonuclease Inhibitor 198 397 IPR032675 -
Vian8g01282 602 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 366 IPR044974 GO:0006952
Vian8g01282 602 SUPERFAMILY L domain-like 51 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01282 Vian-Chr8 31749204 31751369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01282 2 254 WRKY Transcription Factor Family AT4G12020 36.162 6.84e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01282 - - var:108344036 707.212