Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01269 ATGTCAGCATCCTTCAGCTACGATGTGTTCCTCAGCTTCAGAGGTTCTGATACTCGCTACGGTTTCACTGGAAATCTCTACAAAGCTCTTTGTGACAAGGGAATCCATGCCTTCATCGATGATGAAGAGCTTCAAAGAGGGGATGAAATCGGAGAAGCACTTATCGAGGCCATTAAACAGTCTAGGATGGCCATAGTTGTGTTCTCCAAGAACTATGCATCTTCTTCCTTTTGCTTAGATGAACTTGTCAAGATCATTGATTGTGTTAAGGAAAAGGGTCGTCTGATTTTGCCCATTTTCTACGACGTCTGCCCTTCTCATGTTCGAGGCCAGTCTGGGAGTTATGCAGAAGCTTTGGCCATGCACCAGGAAAGGTTCAAAAGCAGCAATCAAAGCCTCATTGATAACATGGGCAGGTTGCAGAAATGGAAGATGGCTCTTAACCAAGCAGCTAATGTGTCCGGAAAGCATTACAAACTTGGAAATGAATATGAACATGAGTTTATAGGGAAGATAGTTAAAGAGGTCTGCAACAAGATAAACCGCAGACCTTTGCATGTTGCAGATTACCCCGTTGGGATGGAGTGTCGAGTGCAAAAAGTGAAGTCACTTCTTCAATTTGGATCTGATACTGGAGTCCACATTGTAGGGATTCATGGAATAGGCGGAATGGGGAAGACAACACTAGCTCGAGCAGTTTACAATTCCATTGCAGACCAATTTGAAGGTTTATGTTTTCTTGATGGTGTGAGAGAAAACGCTGTTAAACAAGGGTTAGTACATCTCCAAGAGATGCTTCTTTCTGAAATAGTTGGAGAGAAGGATATTAGGATAGGAAGTGTAAGCAAAGGAATTTCAATAATAAAGCATAGGCTCCACCGAAAGAAGGTTCTTTTGATTCTTGACGATGTTGACAAACTAGAACAAGTGCGAGCAACGGCTGGAGAGCGTAATTGGTTTGGTTCTGGCAGCAGAGTCATCATAACAACTAGGGACAAACATTTGCTTCAGGGAGTTGATGGAAAATATGAGGTAGAGGACTTAAATGAGGAAGAAGCACTTGAATTGCTTAGTTGGAATGCTTTTAAAGATCACAGAGTTGATCCATGTTACAAGGACATTTCAAACCAAGCAGTGGCTTATGCTTCTGGCCTTCCACTAGCTTTGGAAGTAATAGGTTCCTTGTTGTTTGGAAAAGGTACAAGAGAATGGGAATCTGCATTAGACCAGTTCAAAAAAATCCCTAACAGAAGGATCCAAGAAATACTTAAGGTGAGCTATAATGCTTTAGAGGAAAATCAACAGAGAATTTTTCTTGACATTGCTTGCTGCTTGAAAGGATATGAATTGGAAGAGGTTGAAGACATACTTGGTGTTCATTATGGTGTTTGCATGAAATATGACATAGGAGTGTTGGTGGATAAATCTCTCATAAAAATTAAGAATGGCTGTGTGACACTTCATGAATTGATAGAAGTTATGGGTAAGGAAATCGATCGCCAAGAATCACCCAAAGAGCTTGGGAAACACAGGAGGTTATGGTTCCATAAAGATATAATTCAAGTTTTAGCAGAAAATACAGGGACTAGTGAGATTGAAATAATCTGTTTGGATTTCCCCTTATATGAAGAAGATGAAGAAGTATTTGTAGAATGGGATGGAGAGGCCTTCAAGAAGATGGAAAACCTCAAAACACTAATTATTAGAAACTCTCATTTTTCAAAAGGTCCAGCATATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGACATATCCATTACAGGATTTACCAACTGATTTTCATCCGAGCAAACTTGCCATATGCAAATTACCCAGAAGTTGCTTTACATCACTTGAGTTAGCTACCATATCAAAGAAGTTCATGAATCTGACAGTTCTGAATTTTGATGGGACTGAATGTTTGACAAAAATACCTGACATATCGAGCCTCCAAAATTTAGAAAAACTGACATTTGAGTGTTGTGAGAATTTAGTTGCAATTCATGGTTCTGTGGGTTTTCTTGATAAACTTAAAATCTTGAGTGCTTTTGGCTGCAGCAAGCTTACGAGTTTTCCACCCATCAAGTTGATCTCTCTTGAACGACTAGATATTTCATCTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAATATAACGCAGCTAGAGTTGAAGTACACTCCCTTAAAAGAATTCCCATTTTCATTTAGAAATCTTGCTCGACTTCAAGATTTGGTGCTGGTTGACTGCGGAAATGTTCAGTTGCCGAGTAGCATTGTCATGTTGCCAGAACTGGCTGAGATTTTCGCCCTGGGGTGTAAAGGCTGGCTATTGCCAAAACAAGATGAGAATGATGAAGAAAAATTGAGCTCAGTGTCTTCAAATGTAAAATGTCTTTGTCTCTCAGGCTGCAATCTATCAGATGAATACTTTCCCATGGTTTTAGCATGGTTTGGTAATGTGAAAGAGTTAGAACTATCAAGCAATAGCTTCACATTTCTTCCAGAATGCATCAAACAATGTCGTTCTTTAAAATTACTTAACTTGGATAACTGTGAGCATCTTCGAGAAATTAGAGGGACTCCACCAAATTTAGAATATTTCTCTGCTGGAAATTGCAAATCCATGAGTTTCTGTTGTTCAGCCATGCTATTGGACCAGGAACTGCATGTGGCTGGAAACACTATGTTTTGTTTGCCAGGATCTAGAATACCAGAATGGCTAGAGCAACAAAGTATAGGTCCATCACTATCTTTCTGGTTTCGTGAGAAGTTCCCTGTCATGGATTTGTGTTTTGTTATTGGGCCAATGGGTAAGGACTCTATTTTGTTTAGACCAATCATGACCATCAATGGCAACACAATGGAGATACAGTCCTTAACTGATAAGAGGTTTTGTTTCGATTTCCCTGCATTGGATTATCATATACTCATCATTGGTACAAAGTACATGAAGTTTGGAGATAATCTGGATAAACCACTCTCAAAAAATGAATGGAATCATGTGGTGGTTTCCATTGCTCTTGATTTTGAACCAACCCCTAAAGAGATTATTGTCAAGCAAACTGCACTCCATGTAATCAAACCAGAAAGTAGCATGGATGATATCCAATTCACTGATCCTTGTAAGCAACCATCCTTCAAAGAGAAGCAAAGATTGGTTGACACTGTTGATTGTCACAGACAATTTATGCAGCACCAAACCACTTTGGTTTCATTGGAACCACATGTGAGACAAGGCAGAAATTCACTTTCATTGATTCCACCTCAAGAATGCAAAAATAATCTGAACTGGGATTCATTTTCAACTGGAACAAGTAGCATTGCCAGTGTCCAGGCAGCGGAAAAGATTGGCTATTTTGGGTTTACTGCAACAACGACGCATGGCTTCATTGGATTTACTGCAACGAAGGGGCAGAGAATTGCTTTCATTGCTTTGTTCTCCATCATTGGAGTTGATGGTCTCATGGCAGAGGAGATGCATCACAACTTTCCAAGAATTGACCGTTTGCAGGAGCAACATTTACCTTCGACCATCAAACAAAACTTTGAAGGCTGTAATGGCATCAATGAAGCCAAAGTGAATGAAGTGATAAGATGCAACAACAATTATGGAAATGACAATGAAAGAAACCCATTAGTGGAACAGCTTCTACTGAGAAAGGAGGATGATATTCACAGCAAGAGATACCAACATGTCTGGAAAATGGCTTCGGATCCAATGGAATTAGAATATCTTGTACATATTCAGAAGATCAATCTGTCTCAAAGATAA 3789 0.394 MSASFSYDVFLSFRGSDTRYGFTGNLYKALCDKGIHAFIDDEELQRGDEIGEALIEAIKQSRMAIVVFSKNYASSSFCLDELVKIIDCVKEKGRLILPIFYDVCPSHVRGQSGSYAEALAMHQERFKSSNQSLIDNMGRLQKWKMALNQAANVSGKHYKLGNEYEHEFIGKIVKEVCNKINRRPLHVADYPVGMECRVQKVKSLLQFGSDTGVHIVGIHGIGGMGKTTLARAVYNSIADQFEGLCFLDGVRENAVKQGLVHLQEMLLSEIVGEKDIRIGSVSKGISIIKHRLHRKKVLLILDDVDKLEQVRATAGERNWFGSGSRVIITTRDKHLLQGVDGKYEVEDLNEEEALELLSWNAFKDHRVDPCYKDISNQAVAYASGLPLALEVIGSLLFGKGTREWESALDQFKKIPNRRIQEILKVSYNALEENQQRIFLDIACCLKGYELEEVEDILGVHYGVCMKYDIGVLVDKSLIKIKNGCVTLHELIEVMGKEIDRQESPKELGKHRRLWFHKDIIQVLAENTGTSEIEIICLDFPLYEEDEEVFVEWDGEAFKKMENLKTLIIRNSHFSKGPAYLPNSLRVLEWWTYPLQDLPTDFHPSKLAICKLPRSCFTSLELATISKKFMNLTVLNFDGTECLTKIPDISSLQNLEKLTFECCENLVAIHGSVGFLDKLKILSAFGCSKLTSFPPIKLISLERLDISSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLQDLVLVDCGNVQLPSSIVMLPELAEIFALGCKGWLLPKQDENDEEKLSSVSSNVKCLCLSGCNLSDEYFPMVLAWFGNVKELELSSNSFTFLPECIKQCRSLKLLNLDNCEHLREIRGTPPNLEYFSAGNCKSMSFCCSAMLLDQELHVAGNTMFCLPGSRIPEWLEQQSIGPSLSFWFREKFPVMDLCFVIGPMGKDSILFRPIMTINGNTMEIQSLTDKRFCFDFPALDYHILIIGTKYMKFGDNLDKPLSKNEWNHVVVSIALDFEPTPKEIIVKQTALHVIKPESSMDDIQFTDPCKQPSFKEKQRLVDTVDCHRQFMQHQTTLVSLEPHVRQGRNSLSLIPPQECKNNLNWDSFSTGTSSIASVQAAEKIGYFGFTATTTHGFIGFTATKGQRIAFIALFSIIGVDGLMAEEMHHNFPRIDRLQEQHLPSTIKQNFEGCNGINEAKVNEVIRCNNNYGNDNERNPLVEQLLLRKEDDIHSKRYQHVWKMASDPMELEYLVHIQKINLSQR 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01269 1262 Gene3D Ribonuclease Inhibitor 714 917 IPR032675 -
Vian8g01269 1262 SUPERFAMILY "Winged helix" DNA-binding domain 418 523 IPR036390 -
Vian8g01269 1262 Gene3D Ribonuclease Inhibitor 546 713 IPR032675 -
Vian8g01269 1262 ProSiteProfiles TIR domain profile. 5 180 IPR000157 GO:0007165
Vian8g01269 1262 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 155 IPR035897 -
Vian8g01269 1262 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 866 IPR044974 GO:0006952
Vian8g01269 1262 SMART AAA_5 212 349 IPR003593 GO:0016887
Vian8g01269 1262 Pfam TIR domain 7 181 IPR000157 GO:0007165
Vian8g01269 1262 Gene3D - 5 178 IPR035897 -
Vian8g01269 1262 Pfam NB-ARC domain 197 433 IPR002182 GO:0043531
Vian8g01269 1262 FunFam Disease resistance protein (TIR-NBS-LRR class) 3 182 - -
Vian8g01269 1262 Gene3D - 179 345 IPR027417 -
Vian8g01269 1262 PRINTS Disease resistance protein signature 382 396 - -
Vian8g01269 1262 PRINTS Disease resistance protein signature 215 230 - -
Vian8g01269 1262 PRINTS Disease resistance protein signature 695 711 - -
Vian8g01269 1262 PRINTS Disease resistance protein signature 291 305 - -
Vian8g01269 1262 SMART till_3 6 153 IPR000157 GO:0007165
Vian8g01269 1262 SUPERFAMILY L domain-like 549 904 - -
Vian8g01269 1262 Gene3D - 347 431 IPR042197 -
Vian8g01269 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01269 Vian-Chr8 31685459 31693301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01269 1 829 WRKY Transcription Factor Family AT4G12020 30.698 8.11e-84 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01269 - - var:108344624 2370.89