Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01267 ATGAAATCAAAGGTTTTGAGTCAGCTGATCTTCACAGGTTGTAAGAACATAAGGGAAATACCTGATGTGTCTGGTTCCCCAAATTTGACAGAATTGTGTGTTGATGATTGCATGAATTTGATTCAGATTGATGATTCTGTGGGATTTCTTGATAAGTTGCTGAGGTTTAGTGCTAAAGGATGTACCAAGCTGAGGATTGTTCCACATGGCATAAAGTTGACGTCTCTGGAATATCTTTGCCTTCGAGACTGCAGAAGTCTTGCTGTTTTTCCAGAAATATTGGCCCCAATGGAGAAACTAAAATTTGTTGACTTGGAGGGAACTGCAATAGAAAATCTGCCTCTTTCATTCAACAATCTTAAAGGCCTTCAAAGCATACATCTTAATAGATGCAAAAGGCTTGAAAATAATGCACTATCAAACATCATTCAAATTACAAGAAAATTCTATGTTTTGCCGGGAGAAAGGGTCCCGGAATGGTTTGACCACTCTACCAAGGGAAACTCTCTATGTTTCTGGTTTCGGAGGGATTTCCCCTCTATCACCGTGTGTGCCATTTTAGGAGTTTTGGATAACATAGAAGGACCTTTCTTTGTGAAGTTTAATTTTTTTGTTACAATCAATGATATTGAAATACCTTTCCTCTTTGATTTCAACTACATTTTAGATACTGACCATATGTTTATGTTCAATAATTTTACGTATCCAATGAAATTGGATTGTGGAGGACTAGTTTCAGAGAATGAGTGGAGTTATGGGGAGGTTTTATTTGTGATACCACCCAATTCAGGTAGTTCAGGATCAATCAAATCGAGTGGAGTTTATGTAAACCGAACATGTACAACAACAATGGAGAATGTTAGATTCTCAAATCCTTATCCTCCCAATACTACATTTCCTACCGACCATGGTACAAGAAATCAGCTTGATATACAACAAGATTCATTTGACCCTGTCGTCTCTATGCACACCAGAATGTTAGACAAATTGGCTTACCTTAGCACCCGACAATGGCGTCGCCCTTTCATGTATCCAGAGTGGAAAGAACCTTTGGATAATGTTTTGAGCCCCAACTTGAGCGAAAGTGACTTGTCTGATGTCATAGGTCAAGTAGAGGAAATCTCAAGTGACCTGTCTGATGTCATAGGTCAAATAGAGGAAATCTCAAGTGAAATGGAGGAAGTTCCCCTCCATAATCCTTATCCTTCCGAAACTGTACATGACTCCCACTGCAGCACTTGCCATGAAAATGAAGTGTTCAGAAAACTAGTCGACTGTAGAATTAAAAGCTCAAGGAGCAATCTACACTTGGGAACTAGTTCCACTGTGTTTCCAACAAAAAATGAGCCCTCCGTAAGGAATCAAATTGAACAAACTCAAGAGGATCATGAAGAAATGGACACATTTTATGCTTCTCTAGGTGCTAAGAGTCATGTTTCACATTCCCGTCATAAAACAGCAACCAATGTTCTGAGCAAAATGACCAGGGAAGCTTTGAAAATAGTAGAAGACTTCATCTCAGATGATGCTTTGGTTTTGTTGCATCCTGAACGATTCAGTATTGTGAAAAACAGCTTAGCATACCTCTCCACTTTGTCTGCAGATGATGGAATGTCAATAGCAATGGAAGCACTGATATCAGAAGCTTTAGGGAAGTTCACTCATTGGAGGAGAGATTACACTGAAGCAAGTATGAAAATAGAGACCACAGCATCCGAACTGCAGAGAGCTGATGAATTAGAAGCAGGTTTGGAAAGTAACAAGAACCAGTATGTGGAAGTCATGGCCTTAGAAAATGAGCTGCACCAAAAGTTATCCTGGATGGAGAAAAGAAAAGAAAGTCTAGAAGAGGAAATCAAGGCCATTGAAGCTAACATCGCTGCTTCTGAAATAGAAAAGGGCATGATCCATCAGAGAAAGAGAAATATCTTTGAGGAGGGCAAGACACTTAAAACCCAGAGGGATGAGTTGATGGAAAAATCGCCTTATTTGCAACAAGAGCATAGTTTGGCAATGGAAAAACAAACAAGAATCAAAGTTGAATGGTCAGAATTTAGAAAAAAATTTAGAAAGGTGACTGCAAAGTGTTATGCACCTTGTGTGAGAAGGCTTTTGTCTTTGTCATGGTTCTTGTTGTTGCTGTAG 2145 0.3921 MKSKVLSQLIFTGCKNIREIPDVSGSPNLTELCVDDCMNLIQIDDSVGFLDKLLRFSAKGCTKLRIVPHGIKLTSLEYLCLRDCRSLAVFPEILAPMEKLKFVDLEGTAIENLPLSFNNLKGLQSIHLNRCKRLENNALSNIIQITRKFYVLPGERVPEWFDHSTKGNSLCFWFRRDFPSITVCAILGVLDNIEGPFFVKFNFFVTINDIEIPFLFDFNYILDTDHMFMFNNFTYPMKLDCGGLVSENEWSYGEVLFVIPPNSGSSGSIKSSGVYVNRTCTTTMENVRFSNPYPPNTTFPTDHGTRNQLDIQQDSFDPVVSMHTRMLDKLAYLSTRQWRRPFMYPEWKEPLDNVLSPNLSESDLSDVIGQVEEISSDLSDVIGQIEEISSEMEEVPLHNPYPSETVHDSHCSTCHENEVFRKLVDCRIKSSRSNLHLGTSSTVFPTKNEPSVRNQIEQTQEDHEEMDTFYASLGAKSHVSHSRHKTATNVLSKMTREALKIVEDFISDDALVLLHPERFSIVKNSLAYLSTLSADDGMSIAMEALISEALGKFTHWRRDYTEASMKIETTASELQRADELEAGLESNKNQYVEVMALENELHQKLSWMEKRKESLEEEIKAIEANIAASEIEKGMIHQRKRNIFEEGKTLKTQRDELMEKSPYLQQEHSLAMEKQTRIKVEWSEFRKKFRKVTAKCYAPCVRRLLSLSWFLLLL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01267 714 Gene3D Ribonuclease Inhibitor 2 148 IPR032675 -
Vian8g01267 714 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 6 136 - -
Vian8g01267 714 Coils Coil 598 632 - -
Vian8g01267 714 SUPERFAMILY L domain-like 6 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01267 Vian-Chr8 31659166 31662407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01267 17 136 WRKY Transcription Factor Family AT4G12020 34.167 3.56e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01267 - - var:108344061 1120.15