Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01264 ATGGAGATGGAGATGTACACTAGTCAGCGGTGGAAACCTACTGATGATCAGGTCAAAATGATGACCAATATCTTCAACCACGAGGTCACACATCCCAGCAGAGCCCAAGTCGTCGAGATTGCATCTCGACTCAGGGCCTTCGGAGAAGTCAGTGAATATAATGTACACTGCTGGTTCAACAATCATGGTAACCGGGTCAAGCGCTGGCAAGCGGAATTAGACCCCACTGGCACCGTATTTTCTCAGTTGCCGCTGTACATGTATGAATATGGCTGGGTAATTATGAAGGCGCCGAGGTTGTTGAACTTGTTCCCCGTTCCGATCCTCATCGACGATGACAAGGACGAACGACAAATCCCTCAACCCATGCCTCTCGCATTCCGAACCAGAGCTCCCTCGACGGAGCTCTCCCTTAGACCACCACAACCGGCTCGAGAATTTTTCCACTGA 450 0.5067 MEMEMYTSQRWKPTDDQVKMMTNIFNHEVTHPSRAQVVEIASRLRAFGEVSEYNVHCWFNNHGNRVKRWQAELDPTGTVFSQLPLYMYEYGWVIMKAPRLLNLFPVPILIDDDKDERQIPQPMPLAFRTRAPSTELSLRPPQPAREFFH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01264 149 Gene3D - 8 73 - -
Vian8g01264 149 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
Vian8g01264 149 ProSiteProfiles 'Homeobox' domain profile. 4 69 IPR001356 GO:0003677
Vian8g01264 149 PANTHER WUSCHEL-RELATED HOMEOBOX 13 6 72 IPR044559 GO:0003700
Vian8g01264 149 Pfam Homeodomain 8 68 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01264 Vian-Chr8 31628815 31629366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01264 7 72 Wox Gene Family AT5G59340 37.879 2.27e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian8g01264 Homeodomain 1.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01264 - K01156 vum:124821070 272.707