Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01222 ATGGCTAATTTGCTGACACTGCTTTTTTATGTGGAGATGATAGTGGCGAGTGGTTTCAGTTTGGGAGCAAGTGGCTTGAACATGAACTACTACTTGTTGAGTTGCCCTTTGGCTGACCTTATTGTTAAGAACACAGTCAACAGAGCTCTGCAGAATGATCCCACTCTAGCAGCAGGGCTTGTTAGAATGCACTTCCATGACTGTTTCATAGAGGGATGTGATGGTTCAGTTCTGATCGACTCCACTAAGGACAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGGGGCTATGAAGTAATAGACGATATCAAGGAAGCGCTAGAAAATCAATGCCCAGGAGTCGTTTCATGTGCTGACATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGTCCTGTGTATGACATACCAAAAGGTAGGAAGGATGGAACAAGGTCCAAAATTGAGGATACCATCAATCTTCCTGCACCCATTTTCAATGCTTCTCAGCTCATCAAGGTGTTTGGGCAACGCGGGTTTTCAGCAAAAGACATGGTGGCTCTCTCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCGTTTAAGCAGAGACTTACCCCACTGGATCCATCTTTGGACTCACAATTTGCGAAGACGCTCTCCAAGACATGCAGTGCTGGTGACAGTGCAGAGCAACCCTTTGACTCCACCAGGAACGATTTCGACAACCTATACTTCAACGCTCTGGTCTCAAACAACGGTGTTCTCACATCAGACCAAACGTTGTACACTACCCCACAAACCAGGAACATTGTGAACTCTTATGCAATGAACCAAGCCTTGTTCTTCTTGGATTTTCAACAGGCGATGGTGAAGATGAGCAAGCTCGATGTCAAAGAAGGGTCCAAAGCGGAAGTTCGAAAAAATTGCCATAAAATAAACTGA 945 0.4529 MANLLTLLFYVEMIVASGFSLGASGLNMNYYLLSCPLADLIVKNTVNRALQNDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEALENQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPAPIFNASQLIKVFGQRGFSAKDMVALSGAHTLGVARCSSFKQRLTPLDPSLDSQFAKTLSKTCSAGDSAEQPFDSTRNDFDNLYFNALVSNNGVLTSDQTLYTTPQTRNIVNSYAMNQALFFLDFQQAMVKMSKLDVKEGSKAEVRKNCHKIN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01222 314 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vian8g01222 314 Pfam Peroxidase 42 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 CDD secretory_peroxidase 25 313 IPR033905 GO:0004601|GO:0042744
Vian8g01222 314 FunFam Peroxidase 29 168 - -
Vian8g01222 314 FunFam Peroxidase 161 293 - -
Vian8g01222 314 Gene3D - 29 314 - -
Vian8g01222 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 Gene3D Peroxidase, domain 2 161 293 - -
Vian8g01222 314 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vian8g01222 314 ProSiteProfiles Plant heme peroxidase family profile. 25 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 PANTHER PEROXIDASE 25-RELATED 11 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g01222 314 SUPERFAMILY Heme-dependent peroxidases 25 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01222 Vian-Chr8 30897117 30899128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01222 2 314 Peroxidase AT4G33420 74.121 9.42e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01222 K00430 - gmx:100809245 570.081