Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01219 ATGCCTTTGAAGGAATCAAGAATATCAAGTACTCTATCAGATTTCATGCCTGCCATGAAAAAGAATTCTGAGCAGACTCATTTTGGATCTGTTTTCAACAAGTTGTTGAAGGAGCTTCGAGAACCTGTTGACTTTGAACTTCCTAATTGGTTTAATAAATCAAAGCCAATGCAGTACTCCTATATAAAACGCAATATATATCTCACAAAGAAGGTCAAAAGATCCCGGTTTGATGATGATGGCATATTCTGTTCCTCTTTGCTTACTTATCATGTTGACTGTTCCTGTAGGATGCTTCTGTCTAGCTGTTCATCAGGCTGTAAATGTGGGAGCTCTTGTCTTAACAAACCATTCCAGAATCGCCCTGTGAAAAAGATGAAATTGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCGAACATGGGGAGTTTGTTATAGAATATGTTGGAGAAGTCATTGATGATAGAACATGTGAGGAAAGGCTTTGGAACATGAAACACCGTGGTGAAACAAATTTCTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCAACATATAAGGGAAACAAATCAAGATACATCAACCATAGTTGCTGTCCAAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCGTGACATACAAAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTACATGTAGGCGTAAATTGGGTGTCCGTAAGTCTGTCATTTCAGTGCTGCATTTAGATTAA 822 0.3844 MPLKESRISSTLSDFMPAMKKNSEQTHFGSVFNKLLKELREPVDFELPNWFNKSKPMQYSYIKRNIYLTKKVKRSRFDDDGIFCSSLLTYHVDCSCRMLLSSCSSGCKCGSSCLNKPFQNRPVKKMKLTEKCGSGIVADEDIEHGEFVIEYVGEVIDDRTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAATCRRKLGVRKSVISVLHLD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01219 273 PANTHER SET DOMAIN PROTEINS 31 264 - -
Vian8g01219 273 ProSiteProfiles Post-SET domain profile. 245 261 IPR003616 -
Vian8g01219 273 SMART shorttest3 79 123 IPR006560 GO:0005634|GO:0042054
Vian8g01219 273 SMART PostSET_3 245 261 IPR003616 -
Vian8g01219 273 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 52 273 IPR025787 -
Vian8g01219 273 SMART set_7 121 245 IPR001214 GO:0005515
Vian8g01219 273 Pfam SET domain 133 238 IPR001214 GO:0005515
Vian8g01219 273 Gene3D SET domain 42 268 IPR046341 -
Vian8g01219 273 CDD SET_ASHR3-like 125 261 - -
Vian8g01219 273 SUPERFAMILY SET domain 42 251 IPR046341 -
Vian8g01219 273 ProSiteProfiles SET domain profile. 116 239 IPR001214 GO:0005515
Vian8g01219 273 ProSiteProfiles AWS domain profile. 79 122 IPR006560 GO:0005634|GO:0042054
Vian8g01219 273 FunFam Histone-lysine N-methyltransferase 45 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01219 Vian-Chr8 30871901 30875235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01219 103 260 C2H2 Transcription Factor Family AT2G23740 35.556 2.97e-22 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian8g01219 SET 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01219 - - gmx:100808183 452.595