Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01204 ATGGAGTGCAATAAGGATGAGGCTACCAGGGCTAAAGAAATTGCGGAGAGGAAGTTTGCTGCAAAGGATATATCAGGTGCAAAGAAATTTGCTGTGAAGGCCCTAAATCTATATCCTGAACTTGAGGGTATTTCTCAAATGTTAGCAACACTTGATGTATATATTTCTGCTGAGAATAAAGCTAACGGAGAAGCAGATTGGTACGGTGTACTTGGTGTGGATTCCCTTGCTGACGATGATACAGTAAGGAGACAATACAGGAAGTTAGCTCTCATGCTTCACCCTGATAAGAACAAGTCCATCGGTGCTGATGGGGCCTTTAAACTTGTGTCAGAGGCATGGAGTTTACTGTCAGATAGGGCTAAAAGAGCAGCATATGATAAGAGAAGTGGAAAAGAACGGAAAGTTTCTGCCAAGTTTGGAGGTTCATCAGGACAAAAAAACACTAATGGTAGTTACAATTTTACTAAGACTACCCCTTCAGGTGCAACTGCTCAGAAGAATACCGCCAAAGAACACACTTCATCTTCTGCTCATAAGTCAAAATCAAATACATTTTGGACTGTTTGCAATAGGTGCAAAATGCAGTACGAGTATCTTAGAGTTTATCTTAACCTTAAGCTCTTGTGTCCTTGCTGCCGTACAGCATTTGTTGCTGTAGAGACTGCTCCTCCACCGGCAAGCGGTATTAGGCCTGCAACTCAATGGAATTTTTCACAGAAGAAGCAAACATCCAATCGCCAAGTACCTAGTAAAAGCAAACCAAATGCCGGAAAGCATGACATGGCTGCTCCAAATGTTGGAGCAGGGTCTTATAATAATACTGAAACAGCCAGTTTTCAATGGGCTCCATTCTCAAAATCATCTGGTGTTTCCAACGTTGCTCAAGCTGCAAGTGTGGTTCAACAGGCATATGACAAAGTGAGGCGAGATCGTGAGGAGGCACAAGCGGCTAGCAAAAGGGAAGAAGCCTTAAAAAGGAAGCAGCATGCTTCTAAAAAGGGTTACCATAATCCTGCTAAGAAAAGAAGAGGGGGCACGGAGGATGCAAGTGCAAGTGGTGGTAAGGAAAACCGAATGGGTGGGGGAACAAACCCATCTAAACAGGCTAATTTTGAGTATAATAGGGTTAATGGAATCAACAAGACCGACAGTGTGGGGGATATTTCCCCAGTTGAACTTCGGAATCTTCTTATGGAGAAAGCTAGAAAAGAAATTAGCAATAAACTCAGGGAAAATCAGTCAAATGCTGTTGATAAAACAGTGATGAAAGACAGTGGAAATAACTTCTATAAAGTGAACGATAAAGGAGAAAAAATCCTAAAAAATTCTGAAATGTGTGCTCGAGATAACATTGCCATCAAATCGTTTGCAGGCTCTACAATCGCTAAAGGTAATAGAAAATTTCTAGAAACAACAGCTATAGAAGTACCAGATCCTGACTTCCATGATTTTTACAAAGATCGAACTGAAGTATCTTTCACTCAAAATCAAGTATGGGCTGTATATGATAATGATGATGGGATGCCTCGATGTTATGCAATGATTTGTGGCATCATCTCCCTGAATCCATTCAAGATAAAGATCAGTTGGCTCAACCCAAACACCAACAGTAAACTGGACCCCATAAAATGGGTTGCTTCAGGATTTTCAAAAATTTGTGGTGATTTCAGATTGAGCAGACCTGAAACCTGTAGCTCGCCCAACTTTTTCTCCCACAAGGTTAGGTGGAGAACAGGTGCTGATGGGGCTATTTGTATATATCCCAGGAAGGGGGATGTTTGGGCCATATATAGGAATTGGTCTCCTGACTGGGATGAGCTAACACCAGATGAGGTTATACACAAGTTTGATGTGGTTGAAGTACTTGAGGATTTTATTGAAGGGCATGGCATAGATGTTATCCCACTGGTCAAAGTGGCTGGATTCAGGACGGTATTTCACCACCACTTAGATCCAACAGAAATCAGGATCATTCCGATGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACAGGTCAAGAAGCTCCACATGCTCCAAAGGGTTGCAGGGTGTTGGACCCAGCTGCTACTCCAATTGAGTTTCTTCAGCTAATAGAAGTTGTGAAGGAGGAAGACATGGCAGACAAAGATGATACTGATGTCAAAGAATTAAATGATAACATAGAAAAATATAGAATTATGGGAAAAATTGAGGAAGAAAAGGAGGGGAAGGATGAAGGCATGCAGGAAGTAGATACAAGTGTAAACATGACAAAAGCTAATAGTGAGGAAATGATCAATGATGTGGGAAAACATGAGGAAGGAAAGCAGGAAAAGAACAAAGATATGCAGTCAGTAGAAACTTTGGATGAGGACAGAGAGAAACAAAATACGCAGTAG 2397 0.4134 MECNKDEATRAKEIAERKFAAKDISGAKKFAVKALNLYPELEGISQMLATLDVYISAENKANGEADWYGVLGVDSLADDDTVRRQYRKLALMLHPDKNKSIGADGAFKLVSEAWSLLSDRAKRAAYDKRSGKERKVSAKFGGSSGQKNTNGSYNFTKTTPSGATAQKNTAKEHTSSSAHKSKSNTFWTVCNRCKMQYEYLRVYLNLKLLCPCCRTAFVAVETAPPPASGIRPATQWNFSQKKQTSNRQVPSKSKPNAGKHDMAAPNVGAGSYNNTETASFQWAPFSKSSGVSNVAQAASVVQQAYDKVRRDREEAQAASKREEALKRKQHASKKGYHNPAKKRRGGTEDASASGGKENRMGGGTNPSKQANFEYNRVNGINKTDSVGDISPVELRNLLMEKARKEISNKLRENQSNAVDKTVMKDSGNNFYKVNDKGEKILKNSEMCARDNIAIKSFAGSTIAKGNRKFLETTAIEVPDPDFHDFYKDRTEVSFTQNQVWAVYDNDDGMPRCYAMICGIISLNPFKIKISWLNPNTNSKLDPIKWVASGFSKICGDFRLSRPETCSSPNFFSHKVRWRTGADGAICIYPRKGDVWAIYRNWSPDWDELTPDEVIHKFDVVEVLEDFIEGHGIDVIPLVKVAGFRTVFHHHLDPTEIRIIPMEEMFRFSHQIPSYVLTGQEAPHAPKGCRVLDPAATPIEFLQLIEVVKEEDMADKDDTDVKELNDNIEKYRIMGKIEEEKEGKDEGMQEVDTSVNMTKANSEEMINDVGKHEEGKQEKNKDMQSVETLDEDREKQNTQ 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01204 798 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Vian8g01204 798 Pfam DnaJ domain 66 127 IPR001623 -
Vian8g01204 798 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Vian8g01204 798 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Vian8g01204 798 Gene3D DnaJ domain 63 184 IPR036869 -
Vian8g01204 798 MobiDBLite consensus disorder prediction 311 371 - -
Vian8g01204 798 MobiDBLite consensus disorder prediction 137 178 - -
Vian8g01204 798 MobiDBLite consensus disorder prediction 141 172 - -
Vian8g01204 798 MobiDBLite consensus disorder prediction 311 329 - -
Vian8g01204 798 MobiDBLite consensus disorder prediction 738 798 - -
Vian8g01204 798 MobiDBLite consensus disorder prediction 764 798 - -
Vian8g01204 798 SMART dnaj_3 65 122 IPR001623 -
Vian8g01204 798 Coils Coil 305 328 - -
Vian8g01204 798 PRINTS DnaJ domain signature 122 141 IPR001623 -
Vian8g01204 798 PRINTS DnaJ domain signature 68 86 IPR001623 -
Vian8g01204 798 PRINTS DnaJ domain signature 102 122 IPR001623 -
Vian8g01204 798 PRINTS DnaJ domain signature 86 101 IPR001623 -
Vian8g01204 798 MobiDBLite consensus disorder prediction 232 253 - -
Vian8g01204 798 MobiDBLite consensus disorder prediction 224 270 - -
Vian8g01204 798 CDD DnaJ 66 119 IPR001623 -
Vian8g01204 798 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Vian8g01204 798 Pfam Domain of unknown function (DUF3444) 473 680 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01204 Vian-Chr8 30731942 30734338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01204 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.475 3.16e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01204 - - gmx:100816712 1251.11