Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01178 ATGACGACGGCGACTCTCGGCCCGAAGGAGCGGCGGGCTTTTGGGCTCTGGTGCTGCGTTGTGTGCCTCGCGATCTGCGCTAGGGTTTGCAGCGCGGCCAGATCGGACAAGGAAACGCGCGAGAGGTTCTACGGAAACATAGCCAATTTGACGTCGCCCGAATCCAACAACACCTTGGCCAAGATGTTCGATCGCGTTCTCGAGAAGGAGTTTTCTGAGAATGACCAACCAGAAGAATCTGACAAAAGCAGCTTTAATAGCAGTGTAGCAGATCAGCAGGCTGTATTGGAGACTGTAGCTAAAATTACTCATGAGAAATCAAAGAGAAATGATACACATGAGGGAAATGCTACGAGAGCATTTCAGTTTCAGGATGTGTTCTCACTGGAAAATGAAGATTCTGATGATGTGACAACTTTGATAGACAAAAAGGACAATGTCTTCGTCATGTCTAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCAGATTTGGTGGTTGTAATAGTTTCAGCAGCCATTGCTGGGATTGTCTTTTCTTGTTTGGGACAACCGGTTATCGTGGGCTATCTTCTTGCAGGCTCACTTATTGGACCTGGCGGTTTGAAATTTATTAGTGAAATGGTGCAGGTTGAGACTGTTGCACAATTTGGTGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAATTTTCCCTGGCAAAGTTAAAAGCTGTGGGGGCTGTTGCTGTTCTTGGAGGACTACTTCAAATTGTCATTTTTATGTTCATGTGTGGCATTCTTTCCATGTTATTTGGAGCCTCATTGTCTGAGGGTGTTTTTGTGGGTTCCTTTCTGTCCATGTCATCAACAGCAGTAGTGGTGAAGTTTTTGGTGGAGCGAAATAGTAGTAATGCTCTTCATGTTCAAATTACAATTGGGACGCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGCCTTTTACAAGGAATAATGTCAATGGGGAGACTGCTGCTAGTGTTGTCTTTGTACATCACTGCTACATCCATATTGTCATGGTCATTTGTTCCTCGGTTTCTTAAACTTATGATGCGGCTGTCATCTCAGACTAATGAACTCTATCAGCTTGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTAGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCCACAACAGACTTCGGTCAGCATACTTTGGACCAGGTGGAACCAATTCGTAACCTATTTGCAGCTCTCTTTCTCTCGAGTATTGGAATGCTTATACACGTGCAATTCCTTTGGAACCATGTGGATATCCTGCTGGCATCTGTTATTCTGGTTGTAGTCGTTAAAACTGCTGTTGTTGCTATAGTCACCAAGGCCTTTGGTTATAGCCTTAAGACGGCATTTATTGTTGGTATCTCGCTTGCCCAAATAGGTGAATTTGCTTTTGTCCTCCTGAGTCGTGCTTCAAATCTTCACCTTGTTGAGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGGTTACAACTCCACTTTTGTTTAAATTGATACCTGCTGTCATGAATCTGGGTGTTCTCATGCACTGGTTCCCCTCTGAAAGTACAACACAAATTGAGGGGAAAGTATCTGTGAATGAAGCAAGCAGAATGTTATGA 1731 0.4385 MTTATLGPKERRAFGLWCCVVCLAICARVCSAARSDKETRERFYGNIANLTSPESNNTLAKMFDRVLEKEFSENDQPEESDKSSFNSSVADQQAVLETVAKITHEKSKRNDTHEGNATRAFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIAGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGAVAVLGGLLQIVIFMFMCGILSMLFGASLSEGVFVGSFLSMSSTAVVVKFLVERNSSNALHVQITIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGRLLLVLSLYITATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPSESTTQIEGKVSVNEASRML 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01178 576 Gene3D - 164 547 IPR038770 -
Vian8g01178 576 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 19 570 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vian8g01178 576 Pfam Sodium/hydrogen exchanger family 171 540 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01178 Vian-Chr8 30330463 30340144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01178 33 571 Antiporters AT5G51710 80.926 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01178 K26735 - gmx:100799476 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01178 8 30330463 30340144 Vian8g01178 8 30330463 30340144 ECH