Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01168 ATGATGTTCTCAGCAAATGCTCAATTTGCTAAGAAGACTTACCTCGTTCAAATGGATAAGCCAGTAATGCCAAAAGCCTTCACCAACCACCTTGAATGGTATTCATCAAAGCTGAAATCGGCACTGTCCACATCTCCAGAAGCTGATGCGGACAGTGAGAAGAGAATTATCTACACTTACCAGAATGCTTTTCATGGTGTTGCAGCTAAGTTGACTGAAGGAGAAGCTAAGAAGCTAGAGGCTGAAGAAGGAGTTGTGGCCATATTCCCAGATACAAAGTATGAGCTACACACTACAAGAAGTCCTGCATTCCTCGGGCTTCAACCACAAAAAGCCCCTAACGTGTGGTCAGAAAAGCTTTCTGGCCGTGATGTTATAGTGGGAGTGTTAGATACTGGGATTTGGCCAGAGAGTGAAAGCTTCAAAGATATAAGCATGGGTCCAGTACCTGCTCATTGGAAAGGTGCCTGTGAGATTGGAACAGGATTCACAAAAAGTCACTGCAATAAAAAGGTTGTGGGGGCAAGAGTGTTCTACCATGGATATGAAGCAGCAATTGGTAGAATTAATGAGCAGAAGGAGTACAAATCACCAAGAGATCAAGATGGGCATGGCACTCACACAGCAGCTACAGTTGGTGGCTCTCCTGTGCTTGGGGCTAACCTTCTTGGTTATGCTAATGGCACAGCAAGAGGAATGGCACCAGGTGCAAGGATTGCAGCTTACAAAGTGTGTTGGATTGGTGGGTGCTTTAGCTCAGATATTGTGTCAGCTATTGATAAAGCTGTGGCTGATGGAGTGGATATTCTTTCCATCTCTTTGGGTGGTGGAGTCTCCTCTTATTACCGTGATAGTTTATCTGTTGCTGCATTTGGAGCAATGGAGAAGGGTGTTTTTGTTTCATGTTCTGCAGGAAATGCAGGACCTGATCCTGCCAGCCTCACCAATGTTTCACCATGGATCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCAGCAGAAGTTAAGCTTGGAAATGGTAAGATAGTGACTGGAGTTTCACTCTACAAAGGGCAAAGTGTGCTTTCAATTGAGAAACAATACCCTTTGGTGTACTTGGGGAGCAACTCTAGCAGGGTTGATCCAAGATCCATGTGCTTGGAAGGGACTATGGATCCTAAAGTGGTTTCAGGAAAGATAGTTATATGTGATAGAGGCCTTAGTCCTAGAGTGCAGAAGGGTCATGTGGTGAGAAGTGCAGGAGGGGTGGGAATGATTCTCACAAATACTGAAGCTAATGGAGAAGAACTAGTTGCTGATTGCCATCTCCTTCCAGCAGTTGCAATAGGAGAAAAAGAAGGAAAAGATCTCAAAAGTTATGTCCTATCTAGTCAAAGTGCTACTGCAACTCTAGCTTTTAAAGGTACGAGGTTGGGAATAAGGCCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCAAATTTTCTCAGCCTTGAAATTCTGAAGCCTGATTTAGTAGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGAGGCCATTGGTCCATCAGGTTTGAAAGTGGACAACAGGAGAGAGAAGTTCAATATACTCTCTGGAACCTCAATGTCATGCCCACATGTGAGTGGTGTAGCAGCCTTTCTCAAAGCCAGGCACCCTGAGTGGAGCCCTGCTGCTATAAAATCTGCTTTGATGACAACTGCTTATGTTCTTGACAACACCAAAAAAACTCTCACAGATGCCTCAACTGCTAAACCTTCAAGTCCTTATGATCATGGTTCTGGACACATTGACCCTATCAGAGCTCTGGACCCTGGTTTGGTATATGACATAGAGCCACAGGACTACTTTGAATTCCTATGCACACAGAATCTGACTCCAACCCAACTACAAGTTTTTGCCAAATATTCCAACAGATCTTGCAAACACTCTCTTGCGAGTCCAGGGGACTTGAACTACCCAGCCATATCATCAATCTTTACCCAGAAAACAGCCACTTCATTCTCTAGACCTGTGATTGTTCACAGAACTGTCACCAATGTTGGCCCACCTGATTCCAAATACCAAGTTGTGATCTCACCATTCGAAGGTGCTTCTGTCAAAGTTGAGCCAGAAACTCTAAATTTCACAAAAGAACACCAAAAGCTGTCTTACAAGATTACATTCACGCCAAGGGTTCGGCAAACATCTCCTGAATTTGGAAGTCTGGTATGGAAGAATGGTTTGCACACTGTGAGAAGCCCCATTGTGATAACATGGCTGGCACCACCAATGTGA 2283 0.4463 MMFSANAQFAKKTYLVQMDKPVMPKAFTNHLEWYSSKLKSALSTSPEADADSEKRIIYTYQNAFHGVAAKLTEGEAKKLEAEEGVVAIFPDTKYELHTTRSPAFLGLQPQKAPNVWSEKLSGRDVIVGVLDTGIWPESESFKDISMGPVPAHWKGACEIGTGFTKSHCNKKVVGARVFYHGYEAAIGRINEQKEYKSPRDQDGHGTHTAATVGGSPVLGANLLGYANGTARGMAPGARIAAYKVCWIGGCFSSDIVSAIDKAVADGVDILSISLGGGVSSYYRDSLSVAAFGAMEKGVFVSCSAGNAGPDPASLTNVSPWITTVGASTMDRDFPAEVKLGNGKIVTGVSLYKGQSVLSIEKQYPLVYLGSNSSRVDPRSMCLEGTMDPKVVSGKIVICDRGLSPRVQKGHVVRSAGGVGMILTNTEANGEELVADCHLLPAVAIGEKEGKDLKSYVLSSQSATATLAFKGTRLGIRPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWSEAIGPSGLKVDNRREKFNILSGTSMSCPHVSGVAAFLKARHPEWSPAAIKSALMTTAYVLDNTKKTLTDASTAKPSSPYDHGSGHIDPIRALDPGLVYDIEPQDYFEFLCTQNLTPTQLQVFAKYSNRSCKHSLASPGDLNYPAISSIFTQKTATSFSRPVIVHRTVTNVGPPDSKYQVVISPFEGASVKVEPETLNFTKEHQKLSYKITFTPRVRQTSPEFGSLVWKNGLHTVRSPIVITWLAPPM 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01168 760 CDD Peptidases_S8_3 94 571 IPR034197 -
Vian8g01168 760 Gene3D - 622 756 - -
Vian8g01168 760 Pfam PA domain 362 452 IPR003137 -
Vian8g01168 760 Pfam Fibronectin type-III domain 652 753 IPR041469 -
Vian8g01168 760 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Vian8g01168 760 PRINTS Subtilisin serine protease family (S8) signature 122 141 IPR015500 -
Vian8g01168 760 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Vian8g01168 760 SUPERFAMILY Subtilisin-like 96 609 IPR036852 GO:0004252|GO:0006508
Vian8g01168 760 ProSiteProfiles Serine proteases, subtilase domain profile. 93 605 - -
Vian8g01168 760 FunFam Subtilisin-like protease SBT1.5 124 341 - -
Vian8g01168 760 CDD PA_subtilisin_like 337 466 - -
Vian8g01168 760 FunFam Subtilisin-like protease SBT1.9 2 97 - -
Vian8g01168 760 Gene3D Peptidase S8/S53 domain 124 618 IPR036852 GO:0004252|GO:0006508
Vian8g01168 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 752 IPR045051 -
Vian8g01168 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Vian8g01168 760 FunFam subtilisin-like protease SBT1.5 330 473 - -
Vian8g01168 760 Pfam Subtilase family 122 578 IPR000209 GO:0006508|GO:0008236
Vian8g01168 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 97 IPR037045 -
Vian8g01168 760 Gene3D - 330 474 - -
Vian8g01168 760 Pfam Peptidase inhibitor I9 13 97 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01168 Vian-Chr8 30202827 30205109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01168 11 758 Subtilisin-like Serine Gene Family AT5G51750 69.559 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01168 - - gmx:100794709 1389.79