Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01162 ATGAACTTGAAGCAATACTGTTGTTTCCTCTCAGACGAAGGGCAAAGCAAAATTCAAATTGCTAGGAAGAAGAACAATAGGGATTATCCATGGGAAATGTACACCTTGAAGGAGTTGCTTAGAGCCACAAACAACTTTCATCAAGATAATAAGATTGGAGAGGGTGGATTTGGCAGTATTGCAGTGAAGCGATTGAAGACAATGACTGCGAAAGCAGAAATGGAGTTTGCAGTGGAAGTGGAAGTATTAGGAAGAGAATGTCAGTTAGATTGGGCGAGAAGAATGAGCATAGCAATTGGAGCTGCTGAAGATCCAAAACTGAAGGGGAGATTTGATTTGCAGCAGTTGAAAAATGTGACCACAATAGCTCTTAGATGCACTGATACTAGCGCAGATAAGAGGCCTAACATGAAAGAGGTCGTCAATTGGCTCAAGAATGGTGTAGGGAGCACTTAA 456 0.4167 MNLKQYCCFLSDEGQSKIQIARKKNNRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSIAVKRLKTMTAKAEMEFAVEVEVLGRECQLDWARRMSIAIGAAEDPKLKGRFDLQQLKNVTTIALRCTDTSADKRPNMKEVVNWLKNGVGST 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01162 151 PANTHER OS01G0253100 PROTEIN 26 85 - -
Vian8g01162 151 Gene3D Phosphorylase Kinase; domain 1 10 89 - -
Vian8g01162 151 SUPERFAMILY Protein kinase-like (PK-like) 31 85 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01162 Vian-Chr8 30132376 30133738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01162 33 102 Trihelix Transcription Factor Family AT1G68690 30.252 2.01e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01162 - - vra:106757402 182.57