Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01160 ATGATGTCCCTCTTCTCTTTCTCACATTACAAATTCCTTTGGAGATGTTCAATTGCATTTGCATTTTTCTTAACCCTTTTCTTCATTGCAAACTCACTCACTCTCCAAGCCCAATCCACTTCAACCCCATGCAACAAAGACCCCTACAAGCAACTCAATCTAATCCTTAACCAAAACGGCACCGTCACACGCCCCGACAAACCCCCCGACAGCCCGCCCGCAGAGGATCCCACTCTCCTCGTACTCTCCAAAGACCTCTCCATCAACCGATCCAAGGGCACCTGGGCGAGGCTGTACCTGCCCCGCGCAGCACAGCACCAACGCTCTAAGCTCCCCCTGGTGGTTTTCTTCCATGGTGGAGGGTTCATTTTCCTCAGTGCAGGCTCGACGATCTTCCACGAGTTTTGCTTCAACATGGCAAACGACGTCGTCGCGGTCGTAGCGTCCGTGGAGTACCGTCTCGCGCCGGAACATAGACTCCCCGCGGCGTACGATGATGCCGTGGAGGCGCTGCAGTGGATAAAAGCCAGCCAGGATGATTGGCTCAAAAACCTCGTCGATTACTCGAACGTTTTTCTCATGGGGAGTAGTGCCGGGGGAAACATCGCCTACAACGCGGGTCTACGTGCAGCTGCGGCTGCCGACTATCAGATTCCCAAGATCAAAGGGCTTATTTTGGTTCAACCGTTTTTCAGTGGGACCCGCAGGACAGGTTCGGAGCGGAGGCTGGCGAACGAACCTCACTTGGGCCACTGCTTTAATGACGCGATGTGGGAGTTGTCGTTACCGGTTGGGGTTGACCGTGATCACGAGTATTGCAATCCGACGGCGAGGAAGGGTCCTGCGAGATTGGAATTGATCGAAAAGGTTGGATGGTGGGTACTGGTTACCGGGTGTGGAGGTGACCCACTGGTGGATCGTCAGGTCCAGCTGGTTAAGTTGATGAAAAAGAAGGGTGTGAAAGTTGTGGGGCATTTCACCCCAGGGGATTATCATGGGATTCAAGATTCTGATCCATTGAAGGCAAAGGTGCTATATGGAGTAATCAAAACTTTCATTTCAGCTTTAAATTAA 1074 0.5233 MMSLFSFSHYKFLWRCSIAFAFFLTLFFIANSLTLQAQSTSTPCNKDPYKQLNLILNQNGTVTRPDKPPDSPPAEDPTLLVLSKDLSINRSKGTWARLYLPRAAQHQRSKLPLVVFFHGGGFIFLSAGSTIFHEFCFNMANDVVAVVASVEYRLAPEHRLPAAYDDAVEALQWIKASQDDWLKNLVDYSNVFLMGSSAGGNIAYNAGLRAAAAADYQIPKIKGLILVQPFFSGTRRTGSERRLANEPHLGHCFNDAMWELSLPVGVDRDHEYCNPTARKGPARLELIEKVGWWVLVTGCGGDPLVDRQVQLVKLMKKKGVKVVGHFTPGDYHGIQDSDPLKAKVLYGVIKTFISALN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01160 357 Gene3D alpha/beta hydrolase 49 356 IPR029058 -
Vian8g01160 357 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 114 130 IPR002168 GO:0016787
Vian8g01160 357 SUPERFAMILY alpha/beta-Hydrolases 69 340 IPR029058 -
Vian8g01160 357 Pfam alpha/beta hydrolase fold 114 334 IPR013094 GO:0016787
Vian8g01160 357 PANTHER ARYLACETAMIDE DEACETYLASE 56 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01160 Vian-Chr8 30082204 30083277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01160 58 324 Carbohydrate Esterase AT5G16080 38.849 6.81e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01160 - - gmx:100792597 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01160 8 30082204 30083277 Vian8g01160 8 30082204 30083277 ECH
Vian8g01160 8 30082204 30083277 Vian3g00578 3 5758114 5759130 PCT