Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01153 ATGGGCAAGGAAGGGTATTTTGCTGGAAGATCATCAAAGAAAGGTGTAGTAGTTGGAGGAGGAGGAGGAGGTGATGCTGAAACACAAGCCCCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCCTTTCACTTTCCCAACATAACCCAACAACAAACCTCTTTCAAACCACCCTCATGCACTTTACAAGACCATGCCACAGTCTCCAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAGGATGGTGATGCTCCTGTTTCATCTCTCTCTTCAAAAGAAGAGGATTTTAAAATTCCTAAGAATATTATGCAAATTAAGACAAGTGGAGGCAGAAGAACAGGTGGTGGAAATTTGAATGACTTGTCTGCAGAAATCACCAGCTCACCAGGGACAAAGACACCAACTTTGGTGGCCAGGTTAATGGGTTTGGATCTTCTTCCAGGGACACAGTCACCCTCTTTCTCTTCTTCTTCTTCTTCTTCTTCGTGTCTTTCCGCTCCCAACACACACGGCAATGCGCCACATCTGCACCACCACCTCAGGCACAAGCAACATGTCCAAACGAAGCATAGAAACAGCATAGACAGCAGTGACATTGCAGCCACGAGATCTTTGCCTGAGACACCAAGAATCTCCTTAGCAAGAAGATCAGATGTTGATTACTACCACCACAGATTCTCACTCCAAATCAACAAGGAAAACATGAATCTTGGTGAGGATTTGGAGCTCCCTAGGCTCTCGTTTTCCAAAAAGAAGTGTGATGAGAACAATGGCAGGAGTCCAGGCCACTATGCTAGGCAAATAGTCAAACAGGTTAAGGATAGTGTGGGCAGAAAAGTTGGCCAAGACATCACAAACACTCTCAAAACAAGAGAGGAAATTGTAGGCCAACTCAAAAGCAAAAAATCTTCCAAAACATCACCACTGAAAGCAATTAATGAAACTGAAAGTAGTCCTCTGAAACCACACTCAAACACATCTTCCTATTCCCCAAGGCTTAGATTCATTGACAAGAACAAACAAAGCACCACAGCCACACCATCACCACTCACCCCAAAAGACCAAAACATGCTAAAACTACCATCACCTCCTCCTCCAGTTAACACTCAGCTTTCAAGAGTTTTAGCAAAACCAAAGCCTCAAACATTATCTTTGCCAGAGCAGCAAGATTTTCATCAGAATAGCAAATCTGAACCAAAATGCAAAATGGCTACCAATGAAAAGTTCAACTCAAGGTTCAAAAGGCCTCCTCAGACATCGGACATAATCAGAAACAAACAAGAGGAATCGTTCGTCATTCGTCCCACATCGCCTACTAGAGCCAGTGACACCAAAACTTCTAAAAGCAAGAAAATTCATCCATTGTCAAGTAATCTTCTCAACAACATCAACACTGTGTGTGATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTGTTCGCGCCAGAGGTACAAACAAGAAGGAACAACCACACTCGCCACCCGAGAAACGTCACAGAACAAACATAACAGTGCCTCCGCCACCATTGGAGCACCGCAGCCTCACACCCCACAAGAGCTTCACTACATCACAGCAATCCTTGCCCGTACAACTGCCCTAAACGTGGAGGACAACCCCACAAACCCACCATTAACGTCCCACCAACACCACCACTGGTTCTCCCCAACCCATTCACTTGACCCATCAATCTTCCTCCACCTGGAACACCTCGCCACCAACAAAGATCTGAGCTTTTCCCCGACAGAACAACTGGGTCACCATTGGAATCGGAAGTTACTTTTCGATCTGGTGGACGAGGTTCTGAAGGAGATTCTGCAAGAGAGAGGGAAGAATGGGCTTTGGTTTTCGAAGGGTGTCGGCGGCTGTTGGCACAGTGGGAGCGTTGTGGAGAGGGTGTGGAAGAGGGTGGGTGAGTTCCCACGTGCGAAGTGTGAGGTGTTGGAGGACATTGATGGGTTGATTGAGGGAGAGGACATGCAGAAAGAGAAGGATGGTGAAGGGTTGGAGGAAGAAGGAGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTGGTGCATGAAACGGTTATGCTTATAGATTGCTTGGGAAATGTGAGAAAAGAGAAGTTATTAGATGATGTGAAAATATCACATGTTTGTACTATCTCTCAATTTTAA 2190 0.4553 MGKEGYFAGRSSKKGVVVGGGGGGDAETQAPSGCMCAVFQFFDFHPFHFPNITQQQTSFKPPSCTLQDHATVSKGAEAPRNSLESEDGDAPVSSLSSKEEDFKIPKNIMQIKTSGGRRTGGGNLNDLSAEITSSPGTKTPTLVARLMGLDLLPGTQSPSFSSSSSSSSCLSAPNTHGNAPHLHHHLRHKQHVQTKHRNSIDSSDIAATRSLPETPRISLARRSDVDYYHHRFSLQINKENMNLGEDLELPRLSFSKKKCDENNGRSPGHYARQIVKQVKDSVGRKVGQDITNTLKTREEIVGQLKSKKSSKTSPLKAINETESSPLKPHSNTSSYSPRLRFIDKNKQSTTATPSPLTPKDQNMLKLPSPPPPVNTQLSRVLAKPKPQTLSLPEQQDFHQNSKSEPKCKMATNEKFNSRFKRPPQTSDIIRNKQEESFVIRPTSPTRASDTKTSKSKKIHPLSSNLLNNINTVCDSQESKSSSQLSSCSRQRYKQEGTTTLATRETSQNKHNSASATIGAPQPHTPQELHYITAILARTTALNVEDNPTNPPLTSHQHHHWFSPTHSLDPSIFLHLEHLATNKDLSFSPTEQLGHHWNRKLLFDLVDEVLKEILQERGKNGLWFSKGVGGCWHSGSVVERVWKRVGEFPRAKCEVLEDIDGLIEGEDMQKEKDGEGLEEEGEGLVAEIEGNIWDTLVHETVMLIDCLGNVRKEKLLDDVKISHVCTISQF 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01153 729 MobiDBLite consensus disorder prediction 155 209 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 417 449 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 399 415 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 306 361 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 155 175 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 301 463 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 476 521 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 180 194 - -
Vian8g01153 729 Pfam Domain of unknown function (DUF4378) 527 698 IPR025486 -
Vian8g01153 729 MobiDBLite consensus disorder prediction 380 398 - -
Vian8g01153 729 Pfam DUF761-associated sequence motif 128 157 IPR032795 -
Vian8g01153 729 MobiDBLite consensus disorder prediction 476 523 - -
Vian8g01153 729 MobiDBLite consensus disorder prediction 74 99 - -
Vian8g01153 729 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01153 Vian-Chr8 29972545 29975683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01153 109 699 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 35.427 7.60e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01153 - - gmx:100795947 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01153 8 29972545 29975683 Vian8g01153 8 29972545 29975683 ECH
Vian8g01153 8 29972545 29975683 Vian3g00586 3 5853085 5856402 PCT