Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01147 ATGGGTAAGGGAGGAATGTCAATTGATGATAATGGAGAAGACAAAGAGCAGAATATGGCTGCTTGGCTTCTGGGTATAAACAATCTCAAGATTCAACCTTTCGAGCTTCCTATTCTAGGACCCCATGATGTCAGAGTTAGAATGAAAGCTGTTGGGATCTGTGGGAGTGATGTTCACTACCTCAAGACACTGAGGTGTGCACACTTCATAGTTAAGGAACCAATGGTAATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGTAGTGAGGTAAACAATTTGGTGCCTGGTGACCGTGTGGCGCTTGAACCTGGGATCAGTTGCTGGCGATGCGGCCACTGCAAACAGGGTCGATATAATTTGTGTGATGAAATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCCCTGGCTAATCAGATAGTGCATCCTGCAGACCTATGTTTTAAGCTTCCAGACAACGTGAGTCTAGAGGAGGGGGCCATGTGTGAACCCTTAAGTGTTGGTATTCATGCTTGTAGGAGAGCTAATATTGGACCAGAAACCAATGTGTTGATCATGGGAGCTGGACCCATAGGACTTGTTACACTGCTTGCAGCTCGTGCTTTCGGAGCACCCAAGACTGTCATTGTTGATGTTGATGACTATCGTTTATCTGTTGCAAAATCTCTTGGTGCAGATGACATTGTTAAAGTCTCAACAAACATTCAGGATGTGGCTGAAGAAGTTGAGCTGATACAAAAGGTTATGGGAGCTTCTATAAATGTTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCTACAGCATTGGGTGCTACTCAGCCTGGTGGCAAAGTTTGCCTAGTGGGAATGGGACATTCTGAAATGACTGTCCCACTCACCCCTGCAGCAGCAAGGGAAGTTGATGTGATTGGAGTTTTTCGCTATATGAACACATGGCCTCTTTGTCTTGAGTTTCTAAGGAGTGGGAAAATCGATGTAAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAAAAGGAAGTGGAAGAAGCTTTTGAAACAAGTGCTCGTGGTGGTACTGCCATCAAGGTCATGTTCAATCTTTAG 1095 0.4447 MGKGGMSIDDNGEDKEQNMAAWLLGINNLKIQPFELPILGPHDVRVRMKAVGICGSDVHYLKTLRCAHFIVKEPMVIGHECAGIIEEVGSEVNNLVPGDRVALEPGISCWRCGHCKQGRYNLCDEMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGIHACRRANIGPETNVLIMGAGPIGLVTLLAARAFGAPKTVIVDVDDYRLSVAKSLGADDIVKVSTNIQDVAEEVELIQKVMGASINVTFDCAGFDKTMSTALGATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVIGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01147 364 Pfam Zinc-binding dehydrogenase 192 322 IPR013149 -
Vian8g01147 364 Gene3D - 169 309 - -
Vian8g01147 364 PANTHER SORBITOL DEHYDROGENASE 17 364 - -
Vian8g01147 364 CDD sorbitol_DH 20 363 IPR045306 GO:0016616
Vian8g01147 364 SMART PKS_ER_names_mod 25 362 IPR020843 GO:0016491
Vian8g01147 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Vian8g01147 364 Gene3D - 29 350 - -
Vian8g01147 364 SUPERFAMILY GroES-like 18 190 IPR011032 -
Vian8g01147 364 FunFam Sorbitol dehydrogenase 169 309 - -
Vian8g01147 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 328 IPR036291 -
Vian8g01147 364 Pfam Alcohol dehydrogenase GroES-like domain 41 152 IPR013154 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01147 31 297 Monolignol Biosynthesis Gene Families AT4G37980 26.259 2.51e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01147 K00008 - gmx:100791559 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01147 8 29843845 29847472 Vian8g01147 8 29843845 29847472 ECH