Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01068 ATGGAAACCGCATCTACACTTACCTTCTTCCTCCGCAATGTCGCCGCCAAGTTCCCCTCCCGCCGAGCGCTCTCCGTCGCTGCCAAATTTGACCTCACCCACTCCCGCCTCCATCAACTGGTGGAATCCGCCGCCCAACGGCTGCTCACCGCCGGAATTAAGCCCGGCGATGTCGTCGCCCTCACCTTCCCCAATACCGTCGAGTCTGTTATCATGTTTCTTGCCGTTATTCGAGTGCGGGCAACAGCGGCGCCGTTAAACTCGGCTTACACAGCCGAAGAATTCGAGTTTTATTTATCCGACTCCGAGTCCAAGCTTCTCCTAACATCTTCAGAAGGAAACAACGCAGCTCAAGCCGCATCTTCAAAACTCAACATAGCTCACGCCACGGCTTCGGTAACCCAAGCAGAGAATTACGAACCCGAGCTGAGTCTCTCGCTGAGTCAATCCGACTCGGTTAACTCGGTCGATTCGGTTGAGTCAGTGATTAACGATCCTGATGACGTGGCGCTTTTCCTTCACACCTCCGGCACCACAAGCCGACCCAAGGGAGTGCCGCTCACTCAGCACAACTTGCTCTCTTCGGTACAGAACATTAAATCGGTGTACCGACTCACTGAGTCTGACTCGACGGTGATTGTGCTTCCGCTTTTTCACGTGCACGGTTTGATTGCGGGGTTGCTCAGTTCCCTTGCGGCCGGTGCGGCGGTGGCGCTGCCGGCGGCGGGAAGGTTCTCCGCCTCCGCGTTCTGGAAAGACATGGTGAAGTACAATGCCACGTGGTACACTGCGGTCCCCACCATACACCAGATTATACTGGACCGCCACGCGAACAACCCCGAACCGGTTTACCCGCGGCTCCGGTTCATACGAAGCTGCAGCGCTTCTCTGGCCCCGGCTATTTTGGGCAAACTCGAGGAGGCTTTCGGTGCGCCGGTGTTGGAAGCTTATGCGATGACGGAAGCGTCGCATCTCATGGCTTCGAACCCTTTGCCGCAAGATGGGCCGCACAAAGCCGGGTCGGTTGGAAAGCCCGTGGGCCAAGAAATGGTTATTTTGGACCAAACGGGTCGGGTTCAAGAGGCTGAAGTTAGCGGAGAAGTTTGCATTCGTGGCCCCAATGTTACGAAAGGGTATAAAAATAACGTGGATGCCAATACGGCGGCGTTTGAATTTGGTTGGTTCCATACCGGTGATGTTGGCTACTTGGATTCTGATGGTTATTTGCACCTCGTGGGTCGCATCAAGGAACTCATCAACCGTGGAGGTATTGCGAATATTCTGAATTTAGGGAACCATGCTTTTTCAAAATTCGGTGCATTGACTGTTTTGGAGGAAAATTATGTGAGGAAGGAAGTAGGCGAAAAGATATCACCAATTGAAGTTGATGCTGTTCTGCTTTCACATCCGGACATTGCACAAGCAGTTGCTTTCGGAGCGCCTGATGCCAAGTACGGTGAAGAGATATATTGTGCGGTTATCCCAAGAGAAGGATCAAACGTTGACGAGGCAGAGGTGCTAAGATATAGCAAGAACAATCTTGCATCCTTCAAAGTTCCCAAAAAGGTCTTCATTACTGATTCTTTGCCCAAGACTGCCACCGGAAAGATTTTGCGTCGTCTTGTCACAGAACAATTTGTCTCTCAAATTTGA 1653 0.5227 METASTLTFFLRNVAAKFPSRRALSVAAKFDLTHSRLHQLVESAAQRLLTAGIKPGDVVALTFPNTVESVIMFLAVIRVRATAAPLNSAYTAEEFEFYLSDSESKLLLTSSEGNNAAQAASSKLNIAHATASVTQAENYEPELSLSLSQSDSVNSVDSVESVINDPDDVALFLHTSGTTSRPKGVPLTQHNLLSSVQNIKSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLAAGAAVALPAAGRFSASAFWKDMVKYNATWYTAVPTIHQIILDRHANNPEPVYPRLRFIRSCSASLAPAILGKLEEAFGAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMVILDQTGRVQEAEVSGEVCIRGPNVTKGYKNNVDANTAAFEFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGIANILNLGNHAFSKFGALTVLEENYVRKEVGEKISPIEVDAVLLSHPDIAQAVAFGAPDAKYGEEIYCAVIPREGSNVDEAEVLRYSKNNLASFKVPKKVFITDSLPKTATGKILRRLVTEQFVSQI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01068 550 CDD FACL_fum10p_like 19 544 IPR045310 GO:0016874
Vian8g01068 550 SUPERFAMILY Acetyl-CoA synthetase-like 454 549 - -
Vian8g01068 550 PANTHER ACYL-COA SYNTHETASE 5 548 - -
Vian8g01068 550 Gene3D - 451 549 IPR045851 -
Vian8g01068 550 ProSitePatterns Putative AMP-binding domain signature. 172 183 IPR020845 -
Vian8g01068 550 Gene3D - 6 414 IPR042099 -
Vian8g01068 550 SUPERFAMILY Acetyl-CoA synthetase-like 6 424 - -
Vian8g01068 550 FunFam Peroxisomal-coenzyme A synthetase 6 414 - -
Vian8g01068 550 Pfam AMP-binding enzyme 12 421 IPR000873 -
Vian8g01068 550 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01068 Vian-Chr8 28256101 28259311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01068 5 550 Monolignol Biosynthesis Gene Families AT4G05160 28.036 3.96e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01068 K22133 - gmx:100779306 862.062