Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01066 ATGGAGATCTTGGGTTTACCTGGAACACTTGCTTTCTTTTCCTTTTCACCTCTTCTTTTGCTCTTCAGACTCACCTTTTCTTGGTGGATTTCTCCTATCTATACTCATCTTAAGCTCAAAAGATGTGGATTTGGAGGGCCACCCCCAACTTTTCCTCTTGGGAACATCCAAGAGATGAAAAAGAAGAACACTGTTACTTCTGTTACTTCTTCCCTACTGCCCTCTAACCCCACCCATGATATACACTCTACTGTCTTCCCCTACTTTTCTCGCTGGCAAAACTCTCACGGGAAGGTTTTTATCTATTGGTTGGGTACAGAACCGTTTTTGTACATTGCTGATCCTGAGTTTCTGAAAAAAATGTCCACCGAGGCAATGGCAAGCATGATGAGTGAGTCTACAAATGAAATGATAGAAAGGTGGATTGCACGAATAAACTCGGGTAACTCAGAAATCGATGTGGAAAAAGAGGTTGTGGAAACTGCCGGAGAAATCATTGCAAAAACAAGCTTTGGCATGAAGGGAAGAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGTCACTTTTCAGGACAACAAGATACGTAGGAGTCCCATTTGAGAAGTGTTTCAACGTGATGAAAACCCTAGAGGCCAAGAAACTTGGGAAAGAAATTGATCAACTTTTGCTATCCGTCATAACAAGTCGCATGAAATCGATCAAAAGACAAACTCAAGAAGACTTGCTAGGGTTGTTGTTGCAAGGAAATCATCAAGGTGATGAAAAGTTAGGGAAGACATTCACTACTAGAGATTTGTTGGATGAGTGCAAAACTTTCTTCTTTGCTGGCCATGAAACAACTGCATTGGCTATCTCATGGACCTTGTTGCTTCTTGCTATGCATGAAGATTGGCAAAACCAGTTAAGAGATGAGATCAGAGAAGTGGTCGGAGATAAAGAACTTGATATCAACGTGCTTGCTGGCTTGAAAAAGATGAAGTGGGTGATGAACGAAGTTTTAAGGCTCTACCCAACAGCACCAAATGTGCAAAGGCAAGCGAGAGAAGACATTCAAGTTGATAATTTAAGGATCCCTAATGGAACCAACATGTGGATCGATGTTGTCGCAATGCACCATGATCAAGCGTTGTGGGGAAAAGATGTGAATGAGTTTAGACCAGAGAGGTTCATGAACGATGTAAATGGTGGATGCAACCACAAAATGGGATATTTACCGTTTGGGTTTGGAGGGAGAACGTGTGTTGGAAGAAACTTGAGCTTCATGGAGTATAAGATAGTGCTAACCCTACTTCTCTCTAGATTTAGCTTCAAAGTTTCACCAGGTTATAACCATTCACCCTCTATCATGCTCTCCCTTAGGCCAACCTATGGTCTACATCTCTTAGTTCAACCCCTTAATTAA 1413 0.4168 MEILGLPGTLAFFSFSPLLLLFRLTFSWWISPIYTHLKLKRCGFGGPPPTFPLGNIQEMKKKNTVTSVTSSLLPSNPTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEAMASMMSESTNEMIERWIARINSGNSEIDVEKEVVETAGEIIAKTSFGMKGRNAKEVSEKLRALQMSLFRTTRYVGVPFEKCFNVMKTLEAKKLGKEIDQLLLSVITSRMKSIKRQTQEDLLGLLLQGNHQGDEKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAMHEDWQNQLRDEIREVVGDKELDINVLAGLKKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLRIPNGTNMWIDVVAMHHDQALWGKDVNEFRPERFMNDVNGGCNHKMGYLPFGFGGRTCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHSPSIMLSLRPTYGLHLLVQPLN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01066 470 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Vian8g01066 470 Pfam Cytochrome P450 117 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 Gene3D Cytochrome P450 33 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 124 - -
Vian8g01066 470 SUPERFAMILY Cytochrome P450 80 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian8g01066 470 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01066 Vian-Chr8 28104710 28108101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01066 19 469 Cytochrome P450 AT5G52400 52.485 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01066 - - gmx:100810679 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01066 8 28104710 28108101 Vian8g01066 8 28104710 28108101 ECH
Vian8g01066 8 28104710 28108101 Vian3g00638 3 6453346 6455727 PCT
Vian3g00637 3 6433272 6435270 Vian8g01066 8 28104710 28108101 PCT