Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01059 ATGGTAGCTTGGCCATTCATCCCAAGAGCTCGACAGTCAAACACAAAAGAGGTCAGTTTGAGGATGGATAACTTGACTGGTATCATGGAGCTCAACCAGCAAGAGGGGAAGCTTGACCAGGTTCCTAGAATGAGTGTGTGTAGCCTCACTCTTAGGAGTGTGTTCTTGGTTCCTAGAGTGAGCGTGGGTAGCCTCACCCTTAGGAATTCTATTGCTTTGGCTTCAATGGTTTCAAAGCAACTCGATCGCGTGGGTGGTAAGGTTCGGGTTATCGCTAGGATCCGCGGGTTTTCGGGTCCTGAGGCTAATTTGGAGCCTGACACTTCAAGGACTGTGGATTGGATTTCAGTGAATGACGAGAATTTGGATGATGTCTCCATCTCCTTCAGAGACCATCCCAGTCGTTATTTGGTGGACTATTGCTATAAGGAAGATGAAGACAGTGAAATGATATATTCAAGGGAGGTAAAGCCTTTTGTGTCTGCAGCTTTTGAAGGTCATAACAGCACCGTTATTGCACATGGAGCTAGGGGTAGTGGAAAGACCCACATAATTCAGGGCTCTGCTGAGAGGCCAGGTTTGGCAGTGCTTGCTATTGCTGAGTTTCTTCCAATTGCTGAGAAAAATGGGAAATCCATAAGTGTTTCTTTCTATGAGGTTGATCATCAGGAACGGGCCATGGATTTATTAAATCCAGAGAAGCCGCCAATCTTGGTTTTTGAAGATCGTGGTAGAAATCAGTTTAAAGGATTGAGTCAGGTTCCTGTGAAATCAGTTAATGAATTTCAGAATTTGTACTCCACTGCATGTTTGAGCTTGAAGGGAGCTCCCAAAAAAGGTGGTCAAAGAAGTCATATGGGATTGATTGTGAATGTCGTTTCCCGGAATGAAAGTGTAGGAAGTACTGTCAGCAAAATGAATTTTGTTGACTTAGCAGGGTATGAAGATACCAGAAAGAAAAGTAGTGATGGCTCCTGCCTAACTGAGATTAACAAAATTAACAAGTCAATATATGCATTATTGAATATTTGCCATGCTTTGAGAACAAATGAAAGTCATATTCCCTACCGGGAAAGCAAGCTTACGCGCATACTGCAGGATTCTTTGAGGGGAACTAGCAGAATTTTACTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTAAGCTTGGCTTCAAGGTCATGTCATCGGATTCATCATCAGACATTCTTAGATTCCACCAAGAAAAGTGTAAGTTCAGCAAATATGAGACAGATACCTAAAAATGTTTCTGGGACAGCAAAGAAATTTCATGGTTCTTCTAAACTAACGAAAGGAAGGAAATTGTTTGATGAAGCTAGTCATTCCACACCTAAGGTTGAGAAGGAAATGGTTACTAAAGCATCAAAGCCTTTGATGGATAACTCATTACCTGAGACTGGAAATCATGATAACTCTGGAGTGGAAACGATAGTGAATACTTTAGCATTGACAAATGTTTCATTTCCGAAGGATGACTTATTTGCAAAAGCTAGTCAGGACATGAAACTTTATCCCCCTTTGGAAAATGGTGATTCGTCCTTGAACGCTAGCAGTGAAGTGGAAATCAATTCCCTAGCAGCTAAGGATGTTTTAGTGGATGGAGATGAAGGTAAAAAGGAGAATACCCCTTGTATCAATCATTCCTCTGAATCAATGTCAATAATAGTTCACGAAGGTCATAATTCACCACCCATTAGTTCACAGTTGCGCGATCTTTCCAATAGTCTTAAAATGCTATGCTCTTCAACTTCATCATGCTTGCAAAATTCAGAAAAACAACCCATTCCAGCTATAGAACCAAAAACTCCTATAATTCAACAGAACATGAGCCAATGGGATGAAATGAATGGCAAAAGTCCTTGGGAGACATTCAGCATGCGGGGCTCTGGGATGAAGGTTTGA 1938 0.4154 MVAWPFIPRARQSNTKEVSLRMDNLTGIMELNQQEGKLDQVPRMSVCSLTLRSVFLVPRVSVGSLTLRNSIALASMVSKQLDRVGGKVRVIARIRGFSGPEANLEPDTSRTVDWISVNDENLDDVSISFRDHPSRYLVDYCYKEDEDSEMIYSREVKPFVSAAFEGHNSTVIAHGARGSGKTHIIQGSAERPGLAVLAIAEFLPIAEKNGKSISVSFYEVDHQERAMDLLNPEKPPILVFEDRGRNQFKGLSQVPVKSVNEFQNLYSTACLSLKGAPKKGGQRSHMGLIVNVVSRNESVGSTVSKMNFVDLAGYEDTRKKSSDGSCLTEINKINKSIYALLNICHALRTNESHIPYRESKLTRILQDSLRGTSRILLVSCLNPSFCQDTIYMVSLASRSCHRIHHQTFLDSTKKSVSSANMRQIPKNVSGTAKKFHGSSKLTKGRKLFDEASHSTPKVEKEMVTKASKPLMDNSLPETGNHDNSGVETIVNTLALTNVSFPKDDLFAKASQDMKLYPPLENGDSSLNASSEVEINSLAAKDVLVDGDEGKKENTPCINHSSESMSIIVHEGHNSPPISSQLRDLSNSLKMLCSSTSSCLQNSEKQPIPAIEPKTPIIQQNMSQWDEMNGKSPWETFSMRGSGMKV 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01059 645 PRINTS Kinesin heavy chain signature 166 187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01059 645 PRINTS Kinesin heavy chain signature 354 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01059 645 PRINTS Kinesin heavy chain signature 305 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01059 645 PANTHER KINESIN-RELATED 91 457 IPR027640 GO:0003777|GO:0007018
Vian8g01059 645 Pfam Kinesin motor domain 116 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01059 645 MobiDBLite consensus disorder prediction 626 645 - -
Vian8g01059 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 398 IPR027417 -
Vian8g01059 645 SMART kinesin_4 85 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian8g01059 645 Gene3D Kinesin motor domain 71 401 IPR036961 -
Vian8g01059 645 ProSiteProfiles Kinesin motor domain profile. 87 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01059 Vian-Chr8 27954868 27965574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01059 12 429 Calmodulin-binding Proteins AT5G65930 26.316 1.96e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01059 K10403 - gmx:100809612 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01059 8 27954868 27965574 Vian8g01059 8 27954868 27965574 ECH