Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01047 ATGGTCTTTGTTGGGGGGCCTGATGATCGTGAAGCCTTAGCCATTGCATGGAGGATGGCAGGACGTTCAGGAACACAACTCTCACTGGTTCGAATTCTTTTGTTAGGTGAAGCGGCAAAAGAAGATGCTTCAGTTCATGATGAATCACAAGGGATATTATCTGCAGTAATTGACACAGACAAGCAAAAAGAGTTAGGTGAAGATTATATAAGCACATTCAGACTTACTGCAGTTAACAATAGTGATTCAATATCCTACTCAGAGATTGATGTTCACAGTGATGAAGATATTCCTGCAGTCCTCAAAGAGATAGAAAAAATTGGTTGTGATATTTACATAGTTAGACAAGGGAATTGTAGGAACTCTAAGATCTTCTCAAATTTGTTGGAGTGGTGTGAGTGCTTAGAACTTGGAGTTATTGGAGATATTTTAGTGTCAAACAATTTTGGTTCATGCTCGTTTGTGTTTGTTGTTCAACAATATGGATATGGAGGAATGATTTGTGGAAATAATCTTAACCAGAAGGCAACTAACAAAGGCACATTTGAGTTTGTTGTCTGA 561 0.3815 MVFVGGPDDREALAIAWRMAGRSGTQLSLVRILLLGEAAKEDASVHDESQGILSAVIDTDKQKELGEDYISTFRLTAVNNSDSISYSEIDVHSDEDIPAVLKEIEKIGCDIYIVRQGNCRNSKIFSNLLEWCECLELGVIGDILVSNNFGSCSFVFVVQQYGYGGMICGNNLNQKATNKGTFEFVV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01047 186 PANTHER CATION/H + ANTIPORTER 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g01047 Vian-Chr8 27699722 27700282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g01047 1 161 Antiporter Super Family AT2G13620 38.272 3.11e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01047 - - var:108320251 316.235