Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g01011 ATGTCTACTTCATCATCGGCAAAGCCAGATAGGCGAGACAAGGAACCTTATCAGCATCACATATGTGAAGAATGTGGCAAGGAACTTCCAACCAAAACTGGTTTGAAAATTCACAAACACATTCATAAGAAATCTGATTTGCCTCCTAATGGCTTCGTATGTGAGTATTGTGCTAAGGCTTTTGATTCTAAACGACAGCTAAGTGGACATATGCTCGTTCATAGAACTTAG 231 0.3983 MSTSSSAKPDRRDKEPYQHHICEECGKELPTKTGLKIHKHIHKKSDLPPNGFVCEYCAKAFDSKRQLSGHMLVHRT 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g01011 76 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Vian8g01011 76 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 76 IPR013087 -
Vian8g01011 76 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Vian8g01011 76 Pfam C2H2-type zinc finger 52 74 - -
Vian8g01011 76 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 47 IPR013087 -
Vian8g01011 76 SUPERFAMILY beta-beta-alpha zinc fingers 19 74 IPR036236 -
Vian8g01011 76 Gene3D Classic Zinc Finger 1 76 - -
Vian8g01011 76 SMART c2h2final6 20 42 IPR013087 -
Vian8g01011 76 SMART c2h2final6 52 74 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vian8g01011 zf-C2H2_4 0.00011 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g01011 K04462 - sko:100369171 57.7658