Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00983 ATGGGCGATAAAGAGTTTTACGTTACATCATGCACGTACTTGCCCCCTCGGGTGAATTCAGACACACCATGGTGCACCACAAATGGCATGCTTCCAACTAATGCTTTTCCAATGTTGGAGATGCAGATATGTATTATCTTTCTTGCAACCTTTCTCTTGCACAACATTCTGGGCCGTCTAAGATTCCCCAGATTCACTTCCATGAGCATTGTTGGCCTGATACTTGCAACCAGCTTCACTGAAGAATGGGCTCGGAAGAGTAGAGAGTTGTTCTTTTTTGACTCTCAGGCAAGTCTGGGGATGCTTTCAGTTTTTGGCTACATGCTTTTCCTGTTCTACACAGGGGTGAAAACAGACGTGAGTGTGATTCCCAGGACCAAAAGTAGTTCAGCCACCATAGGGTGTGTTACTATACTGGCTCCATTTATATGCAGCATGACTGTTGTAAATTTATACTCCACAAAATACCTGAACAGTGATCAGGTAGCAAAAGTTAGACTTATCACTGGTGTGTTCTCGGTGACTCCTTTCCCTAACATTTGCACAGTATTAAGTGATCTCAAGATTCTGAATTCGGAGCTAGGTAGATTAAGCCAGTCCGCAGCTTTGGTTACTGAGCTCTTCAATGTGGTCTTCACATCAATCCTTAGTATCTCCAAAATTTTGTCCAGTGATCCAGAAAAAGCCTGGTTTTGCCTCATAGTTTTCATTTTGTTTCTGCTAATTGTTATGTTCGTTTATCGCCCAGCCATGTTTTGGATCATAAAACAGACCCCAGAGGGTTCTCCTGTTAGTGATCACTATGTGTATTTCATACTCATAATGGCTTTTATGGCTTCCTATATCACACATCGCATTGGATTTTTGGCTCTCTTTGGTCCTTTTGCATTGGGCATGGCTACCCCAGAAGGGCCTCCATTAGGCACTGCAGTTATCAAAAAGATTGACACTTTTGTTAACTGGATGTTCATGCCTCTCTTTGTGACCACATGTGTGATGAGGGTGGACCTCAGAGACTTCATGAAATGGAGAGACGAAGTGAGTGGAGAAATTGACCAGTTCATGTTGCAAGCCCTGATTATCATTGCAGTAACTAGCACTGTCAAATTTGTTGTATGCGTGCTGCTTCCTTTGTACCACAGCGTGCCCTTCAGTGACTCAGTTTCTCTCTCTTTGGTCTTGAATTGCAAGGGCGTAGTTGAATTGGCTGGATTCTCTATAATCAGAGATCTCATGGGCATGCCAGACAACGTGTTGGCATTGGTGATAGTGAGCATAATTCTGAGTGCTACAGTGGGGCCATTTCTTCTGGCATATCTCTACGACCCCATGAAGAAATATGCAGGAAACTACACCAAGCGAAACATCTTTGACCTCAAAAACAACTCCGAGCTTCGAGTTCTGACATGCATCCACAGACCCGACAACATTCCTCCGACCATCAACCTTCTCGAAGCCACCTTCCCCACCAAAGACAACCCTCTCTGTGTCTACGCCCTCCAGCTCATAGAACTCATCGGAAGAGCAGCTCCTGTCTTCATCTCTCACCAACTCCAATCAAAGAAAAAACACGACTCAAACGCTTCCATGGCAGACAAACTCATCGATGCGTTCCAAAACTTCGAGCACGAGTTCAAGGATGCACTGGTGGTGAACACCTTCACATCAATCTCACCAACTGAGTTGATGTACGATGACATCTGCACTTTGGCGTTGAACAAGTTCACCTCCCTCATTGTTCTTCCCTTTCATAAAAAGTGGTCTTCTGATGGCAACAGCATTGAGATAGAAGATGAGTCTCTGAGAGAGTTGAACTTCCGTGTCATGCGGAGAGCTCCATGTTCTGTTGGGATATTGATTGAGAGAATGCAAATGACGCATATTTTCTCCCCAGAGACGCCTTACACTGTTTGCATGCTTTTCATTGGAGGGAAAGATGATAGAGAAGCACTTTACTTTGCTAAGAGGATGACTAAGAATCCGCATGTCAGACTCACTGTGGTCAGGTTTTTGGCTAGGAATAATTATTCGGAGGTAACGGATTTGCAGGAACTACTTGACACTGAGATTCTGAATGATATCAGGATTAACGGGAAGGTGGGTGAGACTAATATGAATTACATAGAGAAGATTGTGCAGGATGGACCTGAGACGGCTTTGGTGATTCGGAAGTTGGTGAAGGAGTATGATTTGATCATTGTTGGAAGACAAGCTGGGATTGAAACTCCTCAAACATCTGGGTTGTTGCAGTGGAGTGAGTATCCAGAACTTGGGGTTCTTGGAGATTTGTTGGCTTCAACTGATGCTGCTGGCAAGGCTACTGTGTTTGTGATGCAGCAACAAAGAAGAGAAAGTGATGCTTAA 2364 0.442 MGDKEFYVTSCTYLPPRVNSDTPWCTTNGMLPTNAFPMLEMQICIIFLATFLLHNILGRLRFPRFTSMSIVGLILATSFTEEWARKSRELFFFDSQASLGMLSVFGYMLFLFYTGVKTDVSVIPRTKSSSATIGCVTILAPFICSMTVVNLYSTKYLNSDQVAKVRLITGVFSVTPFPNICTVLSDLKILNSELGRLSQSAALVTELFNVVFTSILSISKILSSDPEKAWFCLIVFILFLLIVMFVYRPAMFWIIKQTPEGSPVSDHYVYFILIMAFMASYITHRIGFLALFGPFALGMATPEGPPLGTAVIKKIDTFVNWMFMPLFVTTCVMRVDLRDFMKWRDEVSGEIDQFMLQALIIIAVTSTVKFVVCVLLPLYHSVPFSDSVSLSLVLNCKGVVELAGFSIIRDLMGMPDNVLALVIVSIILSATVGPFLLAYLYDPMKKYAGNYTKRNIFDLKNNSELRVLTCIHRPDNIPPTINLLEATFPTKDNPLCVYALQLIELIGRAAPVFISHQLQSKKKHDSNASMADKLIDAFQNFEHEFKDALVVNTFTSISPTELMYDDICTLALNKFTSLIVLPFHKKWSSDGNSIEIEDESLRELNFRVMRRAPCSVGILIERMQMTHIFSPETPYTVCMLFIGGKDDREALYFAKRMTKNPHVRLTVVRFLARNNYSEVTDLQELLDTEILNDIRINGKVGETNMNYIEKIVQDGPETALVIRKLVKEYDLIIVGRQAGIETPQTSGLLQWSEYPELGVLGDLLASTDAAGKATVFVMQQQRRESDA 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00983 787 Gene3D - 38 449 IPR038770 -
Vian8g00983 787 Pfam Sodium/hydrogen exchanger family 44 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian8g00983 787 PANTHER CATION/H + ANTIPORTER 34 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00983 Vian-Chr8 26185915 26188691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00983 11 782 Antiporter Super Family AT5G22900 35.122 8.51e-162 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00983 K26731 - gmx:100785558 1174.84