Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00964 ATGGAGAGATACACCGGTCAGCGGTGGAGACCTACTGACGATCAGGTCAAAATGATGACCCATATTTACAATTACGGGGTCACACATCCCAGCAGAGCGCAAGTCGTCGAGATTGCGTCTCGACTAAGGGTTTTCGTAGATGTCAGCGAATACAATGTGCACTGCTGGTTTAACAACCACGGAAATCGGGTCAGGCGCTGGCAAGCGGAGGTAGACCCCACTGGCACTCAGTTTTCACAACTGCCGCTATATATGTATGAATACGACTGGGTGATCATGAGGGCGCCGAGGTTGCTGGACTTGTTCCCCGTTCCAATCATCATCGACGACGATAGGGACGCACGACAAATCCCTCCACCCATGCTTTTCACATTCCGGACCAGAGCTCCCTCGACGGAGCTCTCCCTCAGACCACCGCAACCAGCTCGGGAATTTTTCCGTTGA 444 0.5293 MERYTGQRWRPTDDQVKMMTHIYNYGVTHPSRAQVVEIASRLRVFVDVSEYNVHCWFNNHGNRVRRWQAEVDPTGTQFSQLPLYMYEYDWVIMRAPRLLDLFPVPIIIDDDRDARQIPPPMLFTFRTRAPSTELSLRPPQPAREFFR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00964 147 SUPERFAMILY Homeodomain-like 7 68 IPR009057 -
Vian8g00964 147 CDD homeodomain 8 68 IPR001356 GO:0003677
Vian8g00964 147 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 66 IPR044555 GO:0003700|GO:0099402
Vian8g00964 147 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Vian8g00964 147 Gene3D - 6 71 - -
Vian8g00964 147 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00964 Vian-Chr8 24979141 24979678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00964 5 70 Wox Gene Family AT5G59340 36.364 5.81e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian8g00964 Homeodomain 7.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00964 - K09593 vum:124821070 282.337