Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00950 ATGGCTCTCTCTTATGGCCTTACACTAAGCTTTTCCTTAGTATTTTCAATTCAAAGTCAATGCAACCTTGCAAATTACATAGTATCTGTAGAGAGGTTAAATCAGTATATGCATATACAAAGTGAGGCTGCAGAAGTAATAGAAACAAAACGCCCTCCTTTTAATTGGCCAGATAAAGGTGAAATAGAAATAAATGACTTGCAGGTACGATACAGGCCTGATGGACCACTTATACTTCATGGAATCACATGCACATTCAAAGCAGGACACAAGGTTGGAATTGTTGGCAGAACAGGCAGTGGAAAGTCCACTCTTATTGGTTCTTTATTTCGTCTTGTGGAGCCAGCAGGTGGAAAAATTGTTGTGGATGGCATAGACATATCTTCTATTGGCCTTCATGATTTGAGGTCACGTTTTGGTGTTATACCTCAGGATCCTACCCTTTTTAATGGAACTGTTAGATACAATCTGGACCCTTTGTCTCAACACTCTGATAAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAAGTTGTCCAAGAGAAAGAAGAGGGCTTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAGAGGCAGCTGTTTTGTCTGGGGCGTGCTATTTTGAGAAGCAGTAAGATATTGGTGCTAGATGAAGCCACAGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTGAATTTGCTGATTGTACAGTAATAACAGTAGCACACAGAATACCAACTGTGATGGACTGCACTGTGGTTCTTTCGATCAGTGATGGAAAATTGGTGGAGTATGATGAACCAAACACCTTGATGAAGAGAGAAGGGTCATTGTTCAGACAACTTGTCCGAGAATATTGGTCTCATTTTCACTCTTCAGAATCCCATTGA 927 0.4078 MALSYGLTLSFSLVFSIQSQCNLANYIVSVERLNQYMHIQSEAAEVIETKRPPFNWPDKGEIEINDLQVRYRPDGPLILHGITCTFKAGHKVGIVGRTGSGKSTLIGSLFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQHSDKEIWEVLGKCQLREVVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGRAILRSSKILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTVVLSISDGKLVEYDEPNTLMKREGSLFRQLVREYWSHFHSSESH 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00950 308 Gene3D - 45 297 IPR027417 -
Vian8g00950 308 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 296 - -
Vian8g00950 308 SMART AAA_5 88 271 IPR003593 GO:0016887
Vian8g00950 308 CDD ABCC_MRP_domain2 60 280 - -
Vian8g00950 308 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 296 IPR003439 GO:0005524
Vian8g00950 308 FunFam ABC transporter C family member 3 45 297 - -
Vian8g00950 308 Pfam ABC transporter 79 227 IPR003439 GO:0005524
Vian8g00950 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00950 Vian-Chr8 24162566 24164113 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00950 57 301 Calmodulin-binding Proteins AT2G36910 30.159 2.81e-33 127