Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00917 ATGGAAGTGAAAGCTGAGATTGTATCTAAGGAGACAATAAAACCATCTTCTCCAACATCCAATAAGCTTTTCAAACTCTCTCTCCTCGATCAATTGGCTCCTCCATTTTACGTTCCTATTCTCCTCTTTTACTCTGCTTCCGATGCCACACACAACAAACCAATATCTCACGAATTGAAGGCTTCTTTATCACAAGTCCTCACTCTCTATTATCCCTTTTGCGGAACCCTCAGAGACAACTCAACCGTTGAGTGCAACGATGAGGGCGTTGTTTTCACCGACTGTAGAGTCCCCATGGAACTCTCAAGCCTTCTGAAAAACCCTGACCTTCACCATATCAACCACCTTTTCCCATGCGATCCCTACAACCCTGCAAGGGAAACTCTCACTGGGAACATGGCAGTTCAGTTCAACCACTTCACCTGTGGAGGTTTTGCGCTTGGCGTCTGCTTCTCACACAAGATCGCTGATGCTTCCACAGCTGCATCCTTCCTCACTGCTTGGGCTGCAACATCAAGAGGCAACAAACCGATACTACCACAAATGGAAGAAGGCGCACAGGTTTTTCCGCCGAGGAAGATAGAAATGGACATGATTCGTGGCATGATGGGCCAAAAAAGCATTGTCACAAAGAGGTTTGTGTTCAACAGGACCAACATATCTAGACTGAAGCAAAAGCCGGGGGGCTTCGATTTCACTCCCACTAGTGTGGAAGCCGTGACAGCACTGATATGGAAATCATCACTGGAAGCGGCGAAAGCAAGTTCAGAGGAAGGAAAAATTCCGGCATCTATGGTATCCCACGCGGTGAACATTCGCAGCAGAATGGCCCAAACGCTGTCGGAGCATTCGATGGGAAATCTGTGGCAACAGGCAGTGTCTCCGGTGGTGGAGGCGGAAGGAGAAGTGGGGCTTCGTGATTTGTGCGAGAGAGTGAGAGAAACGGTAAGAAAAATTGATGGAAATTATGTGAGTAAGCTTCAGGGTGATGAATTTTATAAGGTGCTGGAGTCTTTGAAGGAAGCAAGAAGAATGGCCACCGAAAAGGGTGTTCCGTGTTACAGCTTTAGCAGTTGGATGAGATTTGGGTTCTATGAAACGGATTTCGGATGGGGAAAACCAAGTTACGTGCGCACTATCGGAGTCCCTATAAAAAACGTGGTGATTTTGATGGGTACTAAGGTTGGTGATGGCATGGAGGCATGGATAACCTTGACTTCGCGTGACATGTTGCATTTTGAGAAAAATCCAGAACTTCTCGAGTTTCTTTCGTTTGATTCTCAATGA 1287 0.467 MEVKAEIVSKETIKPSSPTSNKLFKLSLLDQLAPPFYVPILLFYSASDATHNKPISHELKASLSQVLTLYYPFCGTLRDNSTVECNDEGVVFTDCRVPMELSSLLKNPDLHHINHLFPCDPYNPARETLTGNMAVQFNHFTCGGFALGVCFSHKIADASTAASFLTAWAATSRGNKPILPQMEEGAQVFPPRKIEMDMIRGMMGQKSIVTKRFVFNRTNISRLKQKPGGFDFTPTSVEAVTALIWKSSLEAAKASSEEGKIPASMVSHAVNIRSRMAQTLSEHSMGNLWQQAVSPVVEAEGEVGLRDLCERVRETVRKIDGNYVSKLQGDEFYKVLESLKEARRMATEKGVPCYSFSSWMRFGFYETDFGWGKPSYVRTIGVPIKNVVILMGTKVGDGMEAWITLTSRDMLHFEKNPELLEFLSFDSQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00917 428 Gene3D - 205 421 IPR023213 -
Vian8g00917 428 Pfam Transferase family 4 419 - -
Vian8g00917 428 PANTHER F21J9.9 6 424 - -
Vian8g00917 428 Gene3D - 1 198 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00917 Vian-Chr8 22475330 22476732 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00917 3 415 Monolignol Biosynthesis Gene Families AT5G48930 23.673 3.24e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00917 - K13065 gmx:100792323 640.958