LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian8g00912	ATGGATTTTATATTTGAAGTGGATGACACAGGAAAAAGAATTCCTAAAGAGAATTACAAGTGTGTTTTTGAGAATTACGTCCAAATCCAAGATACTGCTCTTGGCCAAGCGGAACAGGCTTGGGACTCGGGATTGTGCAGTCGCTGGTATGTGCGTTTGATGCATGAAGATATTGAAATTGTGGAGAAGGATACTGGGGAAAGAGGGACATGCTTCAAGTTCAATGTGGTTCTCAGTGTATGTGAGAATGAGGCAGTGTCTAGTCCAAAGCCTGAGGCTTCCCTTGTGGTTCTTTTGATTGTTGACGAAGAGCGCCAAAGGACTTCACAAAGGTTCATGGAGAGGTTAGGAGGGATCAAAGTGAAAGTTTTGAATACAGGAAAAGGTTTGTTTTATACTCTGAGGAAGATCAAGCTGAAGGCTAAGTATTCTAGTGGCCAAAATTATCCAGTTTTCAAGAAAACTAATATGGGAGCTTCTCCCGGCTTCATCCTTGTTGTGATTGATGCAAATGCAGGACCATTTTCTGAGCTTTACCCGATTGTGTCCAACTTCAATATGTGCTTGGATAAGCCCTTTGTCGGTAGAATCAACTTGAAGGCCCTTAATCAAGATGACATCGTCACATCCAAACCATTTCATGGTACTCGTTTGTTCCAAACCATAAAGCTCCTTCCTGAATTTGGTGGTTCTTGGCAATGCAATTCTGGTAGAGCTAAGAGGGAAATGGCTAATGAGAGAACTACATCGAACACTTACAAGGATCCAGGCGAAAATAACTCTTGTTCATCATGGAGAAACACAAGATGTTGGAAACTCATCAGGGTCTCACAAACCCTTGAGGGGTAA	849	0.4217	MDFIFEVDDTGKRIPKENYKCVFENYVQIQDTALGQAEQAWDSGLCSRWYVRLMHEDIEIVEKDTGERGTCFKFNVVLSVCENEAVSSPKPEASLVVLLIVDEERQRTSQRFMERLGGIKVKVLNTGKGLFYTLRKIKLKAKYSSGQNYPVFKKTNMGASPGFILVVIDANAGPFSELYPIVSNFNMCLDKPFVGRINLKALNQDDIVTSKPFHGTRLFQTIKLLPEFGGSWQCNSGRAKREMANERTTSNTYKDPGENNSCSSWRNTRCWKLIRVSQTLEG	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian8g00912	282	MobiDBLite	consensus disorder prediction	239	258	-	-
	Vian8g00912	282	Gene3D	-	1	86	IPR036890	-
	Vian8g00912	282	Pfam	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	2	78	IPR003594	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian8g00912	Vian-Chr8	22295977	22297322	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian8g00912	1	231	Histidine Kinase Gene Family	AT2G47430	32.468	6.41e-38	140

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian8g00912	-		-	var:108325233	373.629