Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00893 ATGGACCACAGTGCCGATGCACAGCGCACGGACTTGATGACCATAACGCGCTTCGTGCTGAACGAGCAATCCAAGCACCCCGAGTCACGCGGCGATTTCACTATCCTTCTCAATCACATTGTTCTCGGTTGCAAGTTCGTTTGCTCCTCGGTTAACAAGGCTGGACTTGCTAAGCTTATTGGACTCGCTGGAGAGACCAATATTCAGTTTGCAATGCCACTACGATTGTGGGGAGAAGAACAGAAGAAACTAGATGTTCTTTCCAATGAGGTTTTTATCAAGGCTCTCGTAAGCAGTGGCCGAACCTGCATCTTGGTTTCTGAAGAAGACGAAGACGCGATAATTGTGGAGCCTTCTAAGCGTGGAAAGTTGTACTGTGTTGTTTTTGACCCCTTGGATGGCTCGTCTAACATTGATTGTGGGGTTTCCATTGGCACTATTTTTGGAATTTATACGTTAGCAGATGTCCATGAACCAACTATAAAGGATGTCCTGCGTCCTGGGAAGAAAATGGTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGCTTGTGTTAAGTACTGGAGCTGGTGTTAATGGTTTCACCCTTGACCCATCTCTTGGTGAATTCATCCTAACTCACCCTGGCATTAAGATTCCAAACAAAGGAAAGATTTATTCAGTTAATGAAGGAAATGCCAAACACTGGGATGGTCCTACTGCAGCTTACGTTGAAAGATGCAAGTTTCCAGAAGATGGTTCATCGCCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACATTGCTTTACGGAGGCATCTTTTTGTACCCTGGTGACAAGAAAAATCCAAATGGAAAACTTCGTGTTCTGTATGAAGTCTTCCCAATGTCATTTTTGGTGGAACAGGCAGGAGGGCAGTCTTTCACGGGCAAGGAACGGGCACTTGATTTAATTCCAACGAAGTTGCACGAGCGATCTCCCGTTTTCCTTGGTAGCTATGATGATGTTGAGGAAATCAAAGCGCTTTATGCTGCTGAGGCTAAAGAAGAATGA 1053 0.4501 MDHSADAQRTDLMTITRFVLNEQSKHPESRGDFTILLNHIVLGCKFVCSSVNKAGLAKLIGLAGETNIQFAMPLRLWGEEQKKLDVLSNEVFIKALVSSGRTCILVSEEDEDAIIVEPSKRGKLYCVVFDPLDGSSNIDCGVSIGTIFGIYTLADVHEPTIKDVLRPGKKMVAAGYCMYGSSCTLVLSTGAGVNGFTLDPSLGEFILTHPGIKIPNKGKIYSVNEGNAKHWDGPTAAYVERCKFPEDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPGDKKNPNGKLRVLYEVFPMSFLVEQAGGQSFTGKERALDLIPTKLHERSPVFLGSYDDVEEIKALYAAEAKEE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00893 350 PRINTS Fructose-1,6-bisphosphatase signature 83 109 IPR028343 GO:0042132
Vian8g00893 350 PRINTS Fructose-1,6-bisphosphatase signature 164 187 IPR028343 GO:0042132
Vian8g00893 350 PRINTS Fructose-1,6-bisphosphatase signature 195 218 IPR028343 GO:0042132
Vian8g00893 350 PRINTS Fructose-1,6-bisphosphatase signature 221 248 IPR028343 GO:0042132
Vian8g00893 350 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Vian8g00893 350 PRINTS Fructose-1,6-bisphosphatase signature 319 344 IPR028343 GO:0042132
Vian8g00893 350 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 214 343 IPR044015 -
Vian8g00893 350 ProSitePatterns Fructose-1-6-bisphosphatase active site. 285 297 IPR020548 GO:0005975|GO:0042578
Vian8g00893 350 PIRSF FBPtase_SBPase 9 349 IPR000146 GO:0005975|GO:0016791
Vian8g00893 350 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 212 - -
Vian8g00893 350 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 210 IPR033391 -
Vian8g00893 350 CDD FBPase 20 343 IPR000146 GO:0005975|GO:0016791
Vian8g00893 350 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 345 IPR000146 GO:0005975|GO:0016791
Vian8g00893 350 Gene3D - 213 350 - -
Vian8g00893 350 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 345 IPR000146 GO:0005975|GO:0016791
Vian8g00893 350 Gene3D - 4 212 - -
Vian8g00893 350 PIRSF FBPtase 9 348 IPR028343 GO:0042132
Vian8g00893 350 SUPERFAMILY Carbohydrate phosphatase 8 343 - -
Vian8g00893 350 FunFam Fructose-1,6-bisphosphatase class 1 213 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00893 Vian-Chr8 21390355 21395786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00893 K03841 - gmx:100807451 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00893 8 21390355 21395786 Vian8g00893 8 21390355 21395786 ECH
Vian8g00893 8 21390355 21395786 Vian3g00709 3 7391372 7394965 PCT