Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00889 ATGGAAGGGAATTTGTCTCAGGGAGGTATGGTTCAAGGTGGGAGTTCCTTTGGTGGTTTTGATCTGCCTGGATCAATGAGGGTTCATCGGCAAGGGCATCATCCTCATTCCATGAATCAACATCAAACTCATCCTTGCCAAGGGCCTTCAGTGCATTCCTCAGTTCATGATGGTTTTCCTCTCACAATGGGAACCTTGCAGAACTGCGATCAAACAATGGCAATGACTGAGTTTAGTCAGGGAGATAGAAACAAGAACTCTCCAAGTGATGAAAGCTTTGCCGAGGAAGGTGTTGATGGTCATCAAGAAGGAGGTAGAGGAAAAAAGGGGTCGCCTTGGCAGAGGGTGAAGTGGACTGATAAGATGGTGAGGCTTTTGATAACGGCTGTTTCTTACATAGGTGAAGATGCACCATCCGACTGTGGTGGCGCAAGGAGAAAAATTACAGTCCTACAGAAAAAAGGGAAGTGGAAATCGGTTTCCAAGGTCATGGCTGAAAGAGGTTATCGTGTTTCACCTCAGCAGTGTGAGGATAAATTCAATGATCTCAATAAAAGGTACAAAAAGCTTAATGATATGCTAGGCCGGGGAACTTCTTGTCAGGTTGTTGAGAATCCTTCTCTATTGGATGTGATAGATTATCTTTCTGAGAAAGAAAAAGATGAAGTTCGAAAAATATTGAGCTCGAAACACTTGTTCTATGAAGAGATGTGTTCTTACCATAATTGTAACAGGTTGCATTTACCCCATGATCTGGAATTGCAACGATCACTTCAGTTGGCTCATAAAAATAGAGATGATCATGACAGTGATGATGTCAGAAGGTCTCATCATGATGATCACGATGAAGATGATCTAGAAGTGGAAACTGATGATCATGATGATTTTGAGGAGAATTATGCTACTCATGCAGATAGTAGAGGAGTCTATGGGGAAGCGGGGCGACCTATGAAGAGATCGAAACCAGGGCAAGGACATGAAGATGCTGCTACTTTTGGCAGTGCTTTAAACAGCCAAGAGTATAATAAAAGTTCATACCCTCATATGGTTCAATCTGATGTCAATCAAGCTGCACCCGAGAAAATGAGTTCACCATGGTTACAGAAGCAATGGGTTGATTCTCGTTCACTTCAGTTAGAAGAGCAGAAGCTACAAATTCAGGTTGAGATGTTGGAGCTGGAGAAACAAAGATTCAAGTGGCAGAAGTTTAGCAAGAAAAAGGACCGGGAGTTGGAAAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAGAATGAACGTATTGCTTTAGAACTCAAACGAAAGGGAGTGGGTGCTGACTTTAACTAG 1329 0.4251 MEGNLSQGGMVQGGSSFGGFDLPGSMRVHRQGHHPHSMNQHQTHPCQGPSVHSSVHDGFPLTMGTLQNCDQTMAMTEFSQGDRNKNSPSDESFAEEGVDGHQEGGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDAPSDCGGARRKITVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDEVRKILSSKHLFYEEMCSYHNCNRLHLPHDLELQRSLQLAHKNRDDHDSDDVRRSHHDDHDEDDLEVETDDHDDFEENYATHADSRGVYGEAGRPMKRSKPGQGHEDAATFGSALNSQEYNKSSYPHMVQSDVNQAAPEKMSSPWLQKQWVDSRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKDRELEKLKLENERMKLENERIALELKRKGVGADFN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00889 442 PANTHER F16F4.11 PROTEIN-RELATED 1 441 - -
Vian8g00889 442 Coils Coil 374 396 - -
Vian8g00889 442 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Vian8g00889 442 Coils Coil 404 433 - -
Vian8g00889 442 MobiDBLite consensus disorder prediction 1 54 - -
Vian8g00889 442 Gene3D - 118 189 - -
Vian8g00889 442 MobiDBLite consensus disorder prediction 88 113 - -
Vian8g00889 442 MobiDBLite consensus disorder prediction 263 283 - -
Vian8g00889 442 MobiDBLite consensus disorder prediction 78 113 - -
Vian8g00889 442 MobiDBLite consensus disorder prediction 263 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00889 Vian-Chr8 21336452 21337780 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian8g00889 Myb_DNA-bind_4 7.7e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00889 - - gmx:100812134 638.262