Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00874 ATGCTACAAATATTAAGAGCTCTTAATAAGTCTAGCCAAGATGCCAACCAACCTAAAGATGTATCAAAAAGTGTAAACTTCCATGAAGAGTATCTAAGGGCTTTAAGGTCAAAATCCTACGTTGATTTCTTTGACAAAGCTCAATTACTTGCTCACCAACATTGCATTCATTCCAACCAGAATAAATATTCAGAAACCCTCCTTCAACCAGACCAAGAAACTGTACACACCATCATTGATGCAACAATCCTTTCACAGAAACCAGAACTAAAGAAACTCATGCTCGATTACTTTCACGTCAGTGCTGAGGCTTCCCTCATTTGCAGCCATCTTCTCAAAAACATCAATCAAGTTCACTGTAATTACCAGTTCATTCAAAGAGCTCTACAAATCATGGACAGTGATGATGATGACTCACAAGAAAAGTTGAAGCTTATCATTTTTGAGCTCAACTCATTCATCTTGACTAACCCTTTTTCAAATCTCGAGTATCATGACTTCAAGCTCATCAGTGATGAAAACTCATCAGTGTTGAATCGTTTGAAATCAATGAGAAAAACGCTGGAAAGGAACTTCAAGCTAAAGAGATATTTGAAGACGTCAGCATGTTGTGTTACTGTGCTGTGTGACATGGTTGCTGTAACAACACATGCTTTAACTTCAGTAGTCACGCCAACGGTTCTGAAATTTACATGTAAGAGTCTTGAGAAGGAGCTTCCACACTTGAGGTTTTCAAGAAGGTTTCTTGGTAAAGTTTGTGAGCAGCTTGATATGGCAGCTAAGGGATCTTATATATTAAACAAAGACTTTGATACAATGAGTAGACTTGTGGATCGGCTTTACGATGACATTGAACATGTAAGGGCAATGATGCAGCTCTGTTTGAACAAGAAGATTGATAAATTCTCTATGCAAATAGTGAAGGAGCTTAGGAAAAGTGATGCTGGATTTGGGAAAAAAGTGGAAGAACTCAAAGAGCATGCGTGCTTGTGCCTTGTGACGATTAACCGATCAAGAGATTTGGTCACTAAGGAAATGGAAAAAATGGGAACGGTTTCTACATATCGCGACGCCGACATCAACCTCTCCCTCCCCGACGACGCCTTCGACCTCGTCGTCCGCGCCAAGACCGCCCTCGAACTGGCCTGCCCCAATATCGTCTCCTGCGCCGACATCCTCTCCGCCGCAACCCGCGACCTTCTGACCATGCTCGGCTGCCCCTTCTACCCCGTTTTCCTCAAGCGTTGTGACGACCGCTTCTCCTCTGTCGCCTTTGACCCCAACCACCTCCCTACTCCATCCATGCCAATGTCCCAAATCACGAAAATCTTCACCCGTCGCGACTCCTCCATGGGATTCTCCCACTGCTCCGAATTTGTCACCTCTCGACATTATGACTCCCAACAAGTTCGACAACGTGACTTCGCCAAGGATCACGCTAGGTTCTTTAGGGTTTTTGCCTCGGCGATGCAGAAGCTGAGTCTGCTCAATGCGCAAACGGGGAGAAAGGGGGAGATCCAACTCGGATTTTGGTTGTGTGAGGTGGGGAAATGGGGAATGAAGCAATTGTCCTTGATCTTGGATAGATGA 1590 0.4428 MLQILRALNKSSQDANQPKDVSKSVNFHEEYLRALRSKSYVDFFDKAQLLAHQHCIHSNQNKYSETLLQPDQETVHTIIDATILSQKPELKKLMLDYFHVSAEASLICSHLLKNINQVHCNYQFIQRALQIMDSDDDDSQEKLKLIIFELNSFILTNPFSNLEYHDFKLISDENSSVLNRLKSMRKTLERNFKLKRYLKTSACCVTVLCDMVAVTTHALTSVVTPTVLKFTCKSLEKELPHLRFSRRFLGKVCEQLDMAAKGSYILNKDFDTMSRLVDRLYDDIEHVRAMMQLCLNKKIDKFSMQIVKELRKSDAGFGKKVEELKEHACLCLVTINRSRDLVTKEMEKMGTVSTYRDADINLSLPDDAFDLVVRAKTALELACPNIVSCADILSAATRDLLTMLGCPFYPVFLKRCDDRFSSVAFDPNHLPTPSMPMSQITKIFTRRDSSMGFSHCSEFVTSRHYDSQQVRQRDFAKDHARFFRVFASAMQKLSLLNAQTGRKGEIQLGFWLCEVGKWGMKQLSLILDR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00874 529 Pfam Protein of unknown function (DUF677) 57 342 IPR007749 -
Vian8g00874 529 ProSiteProfiles Plant heme peroxidase family profile. 324 529 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00874 529 SUPERFAMILY Heme-dependent peroxidases 357 508 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian8g00874 529 Pfam Peroxidase 354 447 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00874 529 Gene3D - 354 430 - -
Vian8g00874 529 Gene3D Peroxidase, domain 2 431 448 - -
Vian8g00874 529 PANTHER UPF0496 PROTEIN 3-RELATED 17 346 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00874 Vian-Chr8 20268936 20274916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00874 356 460 Peroxidase AT3G28200 55.556 4.17e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00874 - - gmx:121173698 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00874 8 20268936 20274916 Vian8g00874 8 20268936 20274916 ECH