Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00862 ATGACTAGGTCTTGTGCTTATCTTCTGCACTGTTTACTCTTCGTTTCTTTCATTTTGCTCACTGCACAGATACATGCCTCCCAAACAGAAGCCAAATCGCCACTAGTAAAGGGACTCTCATATTCTTTCTATTCCAAAACCTGTCCTAAACTTGAAACCATTGTCAGAAACCATCTCAAGAAGGTCTTCAAGAACGACAATGGCCAAGCTCCTGCCTTACTCCGCATTTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGGGTCAGTGCTGCTAGATGGGAGTCCAGGTGAAAGAGACCAACCAGCAAACGGGGGAATAAGAAGTGAGGCTTTGGAAACCATTGATGACCTCAGAGCTCTTGTTCATAAGGACTGTGGAAGAATCGTTTCTTGCGCAGATATCACTGTCTTGGCTGCACGTGATGCTGTTTCTCTTACAGGAGGCCCTGATTATGCAGTGCCACTGGGAAGACGAGACGGTGTAAGCTTCAGTACAACAGGAACACGTGACCTTCCCAAACCCTTCAACACCACCGGCGCCACCCTCGACGCTTTCGCCGCCAAAAGCTTCGATGCCACAGACGTGGTGGCGTTATCAGGCGCACACACCTATGGCCGTGCACACTGCAGCACCTTCTTCAACAGGCTTTCCCCGCTGGACCCCATCATGGACAAAACCCTAGCCAAGCAGCTCCAATCCACGTGCCCAAATGCAGACTCCGACAACACAGCGAACTTGGACATCAGAACGCCCACAGTGTTTGATAACAAATACTACCTTGATTTGATGAACCGTCAGGGAGTGTTCACCTCTGACCAGGACCTGTTCAGTGATAAGAGGACAAAAGGGTTGGTGAATGCTTTCGCTGTTAACCAAACCCTGTTCTTTGAGAAGTTTGTCGATGCTGTTGTGAGGCTGAGTCAGTTGGATGTGTTGACCGGAAACCAGGGTGAGATTCGTGCCAAATGCAACGTGGTGAATAGCAAGAAATCTGTGTTGCAAGAGGTGGTGCAATTTGTTTATCAGTTTTGA 1035 0.4841 MTRSCAYLLHCLLFVSFILLTAQIHASQTEAKSPLVKGLSYSFYSKTCPKLETIVRNHLKKVFKNDNGQAPALLRIFFHDCFVQGCDGSVLLDGSPGERDQPANGGIRSEALETIDDLRALVHKDCGRIVSCADITVLAARDAVSLTGGPDYAVPLGRRDGVSFSTTGTRDLPKPFNTTGATLDAFAAKSFDATDVVALSGAHTYGRAHCSTFFNRLSPLDPIMDKTLAKQLQSTCPNADSDNTANLDIRTPTVFDNKYYLDLMNRQGVFTSDQDLFSDKRTKGLVNAFAVNQTLFFEKFVDAVVRLSQLDVLTGNQGEIRAKCNVVNSKKSVLQEVVQFVYQF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00862 344 FunFam Peroxidase 173 307 - -
Vian8g00862 344 Pfam Peroxidase 55 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Vian8g00862 344 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Vian8g00862 344 Gene3D - 43 325 - -
Vian8g00862 344 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 CDD secretory_peroxidase 38 327 IPR033905 GO:0004601|GO:0042744
Vian8g00862 344 SUPERFAMILY Heme-dependent peroxidases 38 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 ProSiteProfiles Plant heme peroxidase family profile. 38 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 FunFam Peroxidase 42 184 - -
Vian8g00862 344 Gene3D Peroxidase, domain 2 174 308 - -
Vian8g00862 344 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00862 344 PANTHER - 18 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00862 Vian-Chr8 19937258 19939805 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00862 2 339 Peroxidase AT1G71695 52.601 1.27e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00862 K00430 - gmx:547550 580.867