Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00860 ATGAGGGAATTTGTAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTGAACCTTGGAGGGCGGTGCAAGCACAATAATGATCTCCTTTTGGTTTATGATTACATTCCAAATAGGAGCCTTGACTCTCTCTTATTCAGCAAAAGCTTTGTTTTTGATTGGGATCAAAGATTCAGAATTCTCAAAGGTGTAGCTGCTGGCTTGTTGTATCTGCATGAAGAATGGGAGCAAGTGAAGCAAGCCCAAGGTTTAGAGAAAGCAAGTGAAGCATTGCGGGTCAGTGTAAACAGTCTGGAGATTTCAGCTTCACCCTTGACCGAAAACTGCAATAAGCTTAAAGAATTTTCTCCTAAATCTACGCTGAATTTTGATGAGCCAAGTACTGAAGTGAAGCGCATTCTTAAAGTGGTTGGTCTAAAACTTCTGGTTTACATGCTTCTTATTTGCATTTCTTTGAATCATAAAAAGTGGTTGTCCTAA 489 0.3967 MREFVAEIESLGRLRHKNLVNLGGRCKHNNDLLLVYDYIPNRSLDSLLFSKSFVFDWDQRFRILKGVAAGLLYLHEEWEQVKQAQGLEKASEALRVSVNSLEISASPLTENCNKLKEFSPKSTLNFDEPSTEVKRILKVVGLKLLVYMLLICISLNHKKWLS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00860 162 Pfam Protein tyrosine and serine/threonine kinase 2 76 IPR001245 GO:0004672|GO:0006468
Vian8g00860 162 SUPERFAMILY Protein kinase-like (PK-like) 2 76 IPR011009 -
Vian8g00860 162 PANTHER - 1 81 - -
Vian8g00860 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian8g00860 162 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00860 Vian-Chr8 19922797 19923493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00860 1 81 Receptor kinase-like Gene Family AT5G01560 74.118 3.74e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian8g00860 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00860 - - vra:106770487 152.91