Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00857 ATGTCTAAGACATTGGAAAAAAGACCCCCCCTTGTCCCAGGACTATCGTGGAATTACTATTTTCCTTTAGCATGTCCGACTCTTGAATGGATTGTAAGTAACAATTTGGAGAAAGCATTCAAGAAGGACAGTGGATTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTGCCAATGGTTGTGACGCGTCCATATTGTTGAATGCACCTGATGGAAACGATGAAAAGAGTCACCCTGCTAACATTGGTATAAGGCAAGAGGCTCTTCTCGCCATTGAAGAGCTTCGACGTGTCATTTACAAGCAGTGTCTGCCAGTTGTTTCTTGTTCAGACATCCTTGTCGTTGCAGCACGTGAAGCTGTTCGCCAAATGGGAGGCCCAGATTTTGATGTGCCTCTGGGAAGGAAAGACAGCCTCACGTTCGACCTAGACGGACCCAACAACCTCCCGCCGCCATTCTTCCGAACCGAACAGCTGCTGGGAGTCTTCGGCCAGCGAAACTTCGACGCCACCGACGTTGTTGCCCTCTCTGGAGCCCACACGTACGGCAGGGCTCACTGCTCCTCTCTGGTCAACAGAACCATCGAATCTGACCCACCCATCGACCCGGACTTCAAGAACAAGTTGGTGGCAACGTGTCCCACTTCCCAGTCCTCGAACATTGTGAACCTGGACGCGCGCACCCCGGCCAAGTTCGACAACATGTACTTCATCAACCTGCTGAACCGGCAGGGTGTGTTCACCTCGGACCAGGACCTCGCGAGCCACCCCCAGACGAAGGAGATCGTGAACCTGTTCGCCTCCAACCAGAAGGAGTTCTTCGATAGTTTCGCGGACGCGTTTGTGAAGGTGAGCCAGATCGACGTCATCACCAGCCCTTCTGCAAAACCCTCTCTCCCCACCCGAGCTTACGATCCCTACAAGGATCTCGATGCTCCAATTCGAAACCTTTACCACCTCCCAACCTCGCCGGAGTTCCTCTTCGTTGAAGAGGCCCGCCGAAAGCGCCGCTCATGGGGCGAGAACCTCACCTTCTACACCAGATGCGGCTACCTGGCCGGAGCCATTGGCGGTGCGGGCTCAGGACTCGTTGAGGGCGTCAAGGCCTTTGAGTCCGGGGACACAATGAAGCTCCGAATCAACCGCGTTCTGAACGCGGCGGGACACTCGGGTCGGGTCTGGGGAAACCGGGTCGGGATACTAGGGTTACTCTACGCCGAAATCGAGAGCAGAATCCAGGCGGCAAGAGACGCGGACGACGTATGA 1272 0.548 MSKTLEKRPPLVPGLSWNYYFPLACPTLEWIVSNNLEKAFKKDSGLAPGILRLFFHDCFANGCDASILLNAPDGNDEKSHPANIGIRQEALLAIEELRRVIYKQCLPVVSCSDILVVAAREAVRQMGGPDFDVPLGRKDSLTFDLDGPNNLPPPFFRTEQLLGVFGQRNFDATDVVALSGAHTYGRAHCSSLVNRTIESDPPIDPDFKNKLVATCPTSQSSNIVNLDARTPAKFDNMYFINLLNRQGVFTSDQDLASHPQTKEIVNLFASNQKEFFDSFADAFVKVSQIDVITSPSAKPSLPTRAYDPYKDLDAPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTRCGYLAGAIGGAGSGLVEGVKAFESGDTMKLRINRVLNAAGHSGRVWGNRVGILGLLYAEIESRIQAARDADDV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00857 423 Gene3D Peroxidase, domain 2 153 287 - -
Vian8g00857 423 PRINTS Plant peroxidase signature 49 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Plant peroxidase signature 127 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Plant peroxidase signature 108 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Plant peroxidase signature 281 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Plant peroxidase signature 25 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 Gene3D - 20 294 - -
Vian8g00857 423 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Haem peroxidase superfamily signature 127 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Haem peroxidase superfamily signature 109 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 Pfam Peroxidase 33 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 ProSiteProfiles Plant heme peroxidase family profile. 14 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 FunFam Peroxidase 152 286 - -
Vian8g00857 423 CDD secretory_peroxidase 14 293 IPR033905 GO:0004601|GO:0042744
Vian8g00857 423 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
Vian8g00857 423 FunFam Peroxidase 19 153 - -
Vian8g00857 423 PANTHER - 15 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian8g00857 423 ProSitePatterns Peroxidases active site signature. 47 58 IPR019794 GO:0004601
Vian8g00857 423 Pfam Tim17/Tim22/Tim23/Pmp24 family 349 422 - -
Vian8g00857 423 SUPERFAMILY Heme-dependent peroxidases 11 295 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00857 Vian-Chr8 19835875 19843160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00857 2 293 Peroxidase AT1G71695 49.662 8.85e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00857 K00430 - gmx:100795412 432.95