Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00849 ATGTTGGGGGCTTTGGGGTGTGTGTTCCCTGAACTGTTGGCCCGGAACGGTGTGAAGTTCGGGGAGGCGGTGTGGTTCAAGGCTGGGTCTCAGATATTCAGTGAGGATGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCATGCACAGAGTATCCTTGCCATCTGGGCCACACAGGTGATATTAATGGGTGCAGTGGAGGGTTACCGCATTGCCGGTGGGCCTTTGGGTGAGGTGACTGACCCAATCTACCCGGGTGGGAGCTTCGACCCATTGGGCCTTGCTGAAGACCCAGAGGCCTTTGCTGAATTGAAGGTGAAAGAGTTGAAGAATGGGAGATTGGCCATGTTCTCCATGTTTGGTTTCTTCGTTCAAGCCATTGTCACTGGCAAGGGACCTTTGGAGAACCTCGCTGATCACCTTGCTGACCCTGTCAACAACAACGCCTGGGCCTACGCCACCAACTTTGTCCCTGGAAAGTGA 483 0.5424 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEDGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00849 160 SUPERFAMILY Chlorophyll a-b binding protein 1 157 - -
Vian8g00849 160 Pfam Chlorophyll A-B binding protein 1 126 IPR022796 -
Vian8g00849 160 Gene3D Chlorophyll a/b binding protein domain 1 153 - -
Vian8g00849 160 FunFam Chlorophyll a-b binding protein 3A, chloroplastic 43 153 - -
Vian8g00849 160 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 160 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00849 Vian-Chr8 19452048 19452530 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00849 1 160 Chloroplast and Mitochondria Gene Families AT2G34430 93.168 2.64e-106 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00849 K08912 - gmx:547819 324.324