Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00821 ATGGAGCCTTCGTCCTCTTCGCTTCAGATGGAAACAGCAGAGCGGAAACAATCTAGTCCCCTCCGAAAAATGTTTGCTGTTTCTTCCATTGCTGCGGGAATCCAATTTGGATGGGCCCTGCAACTCTCTCTCTTAACACCCTATGTTCAGACTTTGGGAGTTCCTCATGCCTGGTCCTCTTTCATCTGGCTCTGTGGCCCCATTTCTGGGTTGGTTGTGCAGCCCATTGTAGGGTACACCAGTGATAGATGCACTTCCCGTTTTGGCCGCCGCCGTCCATTCATAATGAGTGGTGCGCTTGCCGTTGCCATCTCTGTGTTTCTCATTGGCTATGCGGCTGATATAGGACACGCCACCGGCGACGATTTAACCAAAAAGACGCGTCCACGAGCGGTGGCCATTTTTGTGATTGGCTTTTGGATCTTGGATGTTGCTAACAACATGCTTCAGGGTCCATGCCGAGCTTTTCTCGGAGATCTTGCCGCTGGAGATCAGAAAAAGACCAGAACTGCCAATGCCTTTTATTCGTTCTTCATGGCCATTGGCAACGTTCTTGGCTATGCCGCTGGCTCCTATGATAAACTCCATCGCATTTTCCCGTTCACTGAAACCAAGGCGTGTGACGTGTTTTGTGCAAACCTGAAAAGTTGTTTTTTCTTCTCAATACTGCTCCTCCTTATTCTTTGTGTCATTGTTCTCACTTGCGTGGAGGATCCACAGTTAAAGCTCGGTTCTGGCAACACTAACAACGATGAAAACCAAGACGTTCAAACCGGATTTTGGTGTTCATGTTTTGGTGAATTGGGTGCTGCCTTTAAGGAATTACAAAAACCAATGTTGATGTTGATGCTTGTAACTGCCATTAACTGGGTCGCATGGTTTCCTTATATGTTGTTTGATACTGATTGGATGGGTCGTGAGGTGTATGGCGGTGATGTGGGCAGTCCAGCATACAATGATGGCGTGCATGCAGGTTCATTGGGGCTCATGTTGAACTCAGTCGTTTTAGCTCTGATGTCATTGGCGGTGGAACCAATGGGTCGTCTTGTCGGAGGAGTTAAGTGGCTATGGGCAATCGTTAACGTTATCCTTGCCGTTGGCATGGCCATGACGGTGGTGATCACAAATGCTGCACGTAACGAACGGAGGCATGACGGAGTCATCGCTGGTCATCCTTCGACCTCTGTTAAAGCTGGCGCATTGAGTTTCTTCTCCGTCCTCGGAATCCCTCTAGCGATTACTTTCAGTGTTCCATTTGCTCTAGCATCTATATACTCCAGTACTTCAGGTGCAGGCCAAGGTTTATCTTTGGGCGTCCTCAATGTTTCAATTGTCGTGCCCCAGATGATAGTATCAGCCATAAGTGGACAATGGGATAAATGGTTTGGTGGTGGTAACTTGCCGGCGTTTGTGTTGGGTGCAGTGGCGGCCACTGTGAGTGCGGTGTTAGCTGTTATTCTGCTGCCAAATCCGAAGCCAGCAGATGAGAGCAAAGCTTCCGTTACCGTGGGGGGTTTCCATTAG 1524 0.4875 MEPSSSSLQMETAERKQSSPLRKMFAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWSSFIWLCGPISGLVVQPIVGYTSDRCTSRFGRRRPFIMSGALAVAISVFLIGYAADIGHATGDDLTKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANAFYSFFMAIGNVLGYAAGSYDKLHRIFPFTETKACDVFCANLKSCFFFSILLLLILCVIVLTCVEDPQLKLGSGNTNNDENQDVQTGFWCSCFGELGAAFKELQKPMLMLMLVTAINWVAWFPYMLFDTDWMGREVYGGDVGSPAYNDGVHAGSLGLMLNSVVLALMSLAVEPMGRLVGGVKWLWAIVNVILAVGMAMTVVITNAARNERRHDGVIAGHPSTSVKAGALSFFSVLGIPLAITFSVPFALASIYSSTSGAGQGLSLGVLNVSIVVPQMIVSAISGQWDKWFGGGNLPAFVLGAVAATVSAVLAVILLPNPKPADESKASVTVGGFH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00821 507 Gene3D MFS general substrate transporter like domains 17 491 IPR036259 -
Vian8g00821 507 CDD MFS_SLC45_SUC 24 484 - -
Vian8g00821 507 FunFam Sucrose transport protein 18 488 - -
Vian8g00821 507 NCBIfam sucrose/proton symporter 20 492 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vian8g00821 507 SUPERFAMILY MFS general substrate transporter 22 493 IPR036259 -
Vian8g00821 507 PANTHER SUGAR TRANSPORTER 20 487 - -
Vian8g00821 507 Pfam MFS/sugar transport protein 25 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00821 Vian-Chr8 18186677 18189175 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00821 5 507 Sucrose Transporter Gene Family AT1G22710 62.353 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00821 K15378 - gmx:100782007 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00821 8 18186677 18189175 Vian8g00821 8 18186677 18189175 ECH