Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00817 ATGGTGGCAGTGTCATCCATTGCCGCCGGAATCCAATTTGGATGGGCTCTACAACTCTCCCTCCTCACACCATATGTACAAACCCTAGGAGTTCCACACGTTTGGGCTTCCTTCATATGGCTTTGTGGCCCCATCTCTGGCCTCCTAGTTCAGCCTATTGTAGGCTACAGCAGTGACCATTGCCAATCTTCCTTTGGCCGTCGCCGTCCATTTATCCTCGCCGGCGCAATAGCTGTCGCAATCGCCATTATCCTTATTGGCTATGCTTCCGATATAGGACACATGGCCGGCGATGACATCACAAAGAAAACTCGTCCACGGGCCGTTGCCATCTTCGTCGTCGGCTTTTGGATCTTAGATGTTGCCAACAACATGCTCCAGGGACCATGTCGTGCCTTCCTTGGTGACTTGGCTGCCGGCGATCCCAAAAAAACGAGAACCGCCAACGCATTCTTCTCATTTTTCATGGCTGTGGGCAACGTCCTGGGCTATGCCGCAGGATCCTATAACGATCTCCACAAGATCTTCCCTTTCACTGAAACCGAGGCATGCAACATATTCTGTGCAAACCTAAAGAGTTGCTTCTTCTTCTCAATCGTTCTTCTTCTTGTTTTGTGCATTATCGTTCTGACTTGCGTGAACGACCCTAAGTTCACACCGGCACCAAAGGAGGTGAAGGTAGAAGATGGGAAGACACAAGTTTCGTGCTTCTACGGAGAGTGTTGTGTTGCATTCAAAGGACTGGAGAAGCCAATGTGGATGTTGATGCTAGTGACAGCTATCACATGGATTGCGTGGTTCCCTTATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTACGGCGGTGATGTGGGTCAGAAGGCATACGATGCTGGTGTGCATGCTGGTTCTTTGGGGCTCATGTTGAATTCAGTGGTGTTGGCTGTGGCGTCTTTGGGTGTAGAACCATTGGGTCGCTTGGTTGGTGGAGTCAAGTGGTTGTGGGCAATCGTTAATGTTATTCTCGCAGTTTGCTTAGCAATGACCGTGCTCATCACAAGAGTCGCTGAGCGACAACGTGCCAATAACCCTGCTCTCATTGGAAACCCTTCCATGGATGTGAAAATTGGATCCTTAGCTTTCTTCTGCGTCCTTGGTATTCCTCTTGCGGTTACGTATAGTGTTCCCTTTGCTCTGGCCTCTATCTATTCTAACAACTCAGGTGCAGGACAAGGATTATCTTTGGGTCTTCTGAATGTTTCAATTGTGATTCCTCAGATGATTGTATCAGCAATTAGTGGACCATGGGATGCTTTGTTTGGTGGTGGCAACTTGCCCGCATTCGTGTTGGGCGCTGCAGCGGCCGCCATAAGTGCCGTACTTGCAATTGTTCTACTTCCAAACCCCACAAAGGAAGATGAAGCAAAGATTTCCAGCCTCAACATGGTGCGAGACAGTGGAGAAGGGAAGTTTCACCTTGGCTCTGGCCTGTTGCTGAGTATAGTGCCCGGTGTGCGATTCGTCGTCATTTTTACTTGTAAGTCCGTAAGGAGTAGGGAAACGAGACCTTTACCCGTGAGGACGAGACGAATCGAACCACCCTCTTTGAAAGAATATGTATGTGTGGTAGGGTACAAGAGATAG 1629 0.4929 MVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHVWASFIWLCGPISGLLVQPIVGYSSDHCQSSFGRRRPFILAGAIAVAIAIILIGYASDIGHMAGDDITKKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDPKKTRTANAFFSFFMAVGNVLGYAAGSYNDLHKIFPFTETEACNIFCANLKSCFFFSIVLLLVLCIIVLTCVNDPKFTPAPKEVKVEDGKTQVSCFYGECCVAFKGLEKPMWMLMLVTAITWIAWFPYVLFDTDWMGREVYGGDVGQKAYDAGVHAGSLGLMLNSVVLAVASLGVEPLGRLVGGVKWLWAIVNVILAVCLAMTVLITRVAERQRANNPALIGNPSMDVKIGSLAFFCVLGIPLAVTYSVPFALASIYSNNSGAGQGLSLGLLNVSIVIPQMIVSAISGPWDALFGGGNLPAFVLGAAAAAISAVLAIVLLPNPTKEDEAKISSLNMVRDSGEGKFHLGSGLLLSIVPGVRFVVIFTCKSVRSRETRPLPVRTRRIEPPSLKEYVCVVGYKR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00817 542 PANTHER SUGAR TRANSPORTER 1 460 - -
Vian8g00817 542 SUPERFAMILY MFS general substrate transporter 4 466 IPR036259 -
Vian8g00817 542 CDD MFS_SLC45_SUC 1 446 - -
Vian8g00817 542 Gene3D MFS general substrate transporter like domains 1 224 IPR036259 -
Vian8g00817 542 Pfam MFS/sugar transport protein 13 217 - -
Vian8g00817 542 NCBIfam sucrose/proton symporter 1 466 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vian8g00817 542 Gene3D MFS general substrate transporter like domains 249 473 IPR036259 -
Vian8g00817 542 FunFam Sucrose transport protein 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00817 Vian-Chr8 17987471 17991198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00817 1 470 Sucrose Transporter Gene Family AT1G22710 63.522 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00817 K15378 - gmx:100785899 760.755