Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00816 ATGGTGGCGGTGTCATCCATCGCTGCCGGTATCCAATTCGGATGGGCCCTACAACTCTCCCTTCTAACACCATATGTACAAACCCTAGGAGTTCCTCATGCTTGGGCCTCTTTCATCTGGCTCTGTGGCCCCATCTCTGGCCTCGTAGTTCAGCCCATTGTAGGCTATTGCAGTGACCATTGCAAGTCTCCTTTCGGTCGTCGTCGTCCCTTTATCCTCGCCGGTGCACTTTTCGTTGCCATAGCCATTATTCTTATTGGCTTCGCTGCCGATATAGGACACTTAGCTGGCGATGACATCACCAAGAAAACCCGTCCACGTGCCGTCGCCATTTTCGTCATTGGCTTCTGGATCTTAGATGTTGCCAACAACATGCTCCAAGGTCCATGTCGCGCCTTCCTCGGTGACTTGGCTGCCGGCGATCAGAAGAAGACGAGAACCGCAAACTCGTTCTACTCTTTTTTCATGGCTGTCGGCAACGTCCTGGGCTATGCCGCAGGATCTTATGACGGTCTCCACAAGATCTTCCCTTTCACAGAAACTGAGGCATGCAACGTCTTCTGCGCAAACCTAAAGAGTTGCTTTTTCTTCTCCATCGTTCTTCTTCTTGTTCTATGCATTATCGTTCTCTCTTGCGTGAATGACCCTCAGTTCATTCCGGCATCTGAGAAGATGAAGGTTGAGGAGGCAGAGAACACGCACGTTTCATGCTTCTGCGGAGAGTTGTGCGTTGCATTCAAGGGACTGAAGAAGCCAATGTGGATGTTGATGCTAGTGACAGCTATTACATGGATTGCGTGGTTCCCATATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTACGGCGGTGATGTGGGTCAGAAGGCATACGATGATGGTGTGCATGCTGGTTCTTTGGGGCTCATGTTGAATTCAGTGGTGTTGGCTGTGGCGTCTTTGGGTGTAGAACCACTAGGTCGCTTGGTTGGTGGAGTCAAGTGGTTGTGGGCAATCGTTAATGTTATTCTCGCAGTTTGCATGGCAATGACTGTGCCCATTGCAAAAATCGCTGAGCATCAACGTGCCCTTAACCCTGCCCTCATTGGAAACCCCTCAATGAATGTGAAAGCTGGATCCTTAGCCTTCTTCTGCGTCCTTGGTATTCCTTTGGCGGTTACGTATAGTGTTCCCTTTGCTTTAGCCTCTATCTACTCTAGCAACTCAGGAGCAGGACAAGGACTATCTTTGGGTCTTCTCAATGTTGCAATTGTGATTCCTCAGATGATTGTATCGGCAATTAGTGGACCATGGGATTCTTGGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGTTGGGCGCGGTGGCGGCTGCCATAGGTGCCATACTGGCAGTTGTTGTACTTCCAAACCCCAAGAAACACGATGCAACCAAGATTCCTAGCCTCTCCATGGGAAGTTTCCATTAA 1449 0.501 MVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYCSDHCKSPFGRRRPFILAGALFVAIAIILIGFAADIGHLAGDDITKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANSFYSFFMAVGNVLGYAAGSYDGLHKIFPFTETEACNVFCANLKSCFFFSIVLLLVLCIIVLSCVNDPQFIPASEKMKVEEAENTHVSCFCGELCVAFKGLKKPMWMLMLVTAITWIAWFPYVLFDTDWMGREVYGGDVGQKAYDDGVHAGSLGLMLNSVVLAVASLGVEPLGRLVGGVKWLWAIVNVILAVCMAMTVPIAKIAEHQRALNPALIGNPSMNVKAGSLAFFCVLGIPLAVTYSVPFALASIYSSNSGAGQGLSLGLLNVAIVIPQMIVSAISGPWDSWFGGGNLPAFVLGAVAAAIGAILAVVVLPNPKKHDATKIPSLSMGSFH 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00816 482 Gene3D MFS general substrate transporter like domains 1 464 IPR036259 -
Vian8g00816 482 SUPERFAMILY MFS general substrate transporter 4 470 IPR036259 -
Vian8g00816 482 CDD MFS_SLC45_SUC 1 445 - -
Vian8g00816 482 PANTHER SUGAR TRANSPORTER 1 461 - -
Vian8g00816 482 Pfam MFS/sugar transport protein 13 167 - -
Vian8g00816 482 FunFam Sucrose transport protein 1 462 - -
Vian8g00816 482 NCBIfam sucrose/proton symporter 1 467 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00816 Vian-Chr8 17874920 17876837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00816 1 465 Sucrose Transporter Gene Family AT1G22710 63.347 0.0 609