Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00815 ATGGAGGAGCAAGTAAAACAAGAACCGAGTCCTCTGAGAAAAATGGTGGCAGTGTCATCCATTGCCGCCGGAATCCAATTTGGATGGGCTCTACAACTCTCCCTCCTCACACCATATGTACAAACCCTAGGAGTTCCACACGTTTGGGCTTCCTTCATATGGCTTTGTGGCCCCATCTCTGGCCTCCTAGTTCAGCCTATTGTAGGCTACAGCAGTGACCATTGCCAATCTTCCTTTGGCCGTCGCCGTCCATTTATCCTCGCCGGCGCAATAGCTGTCGCAATCGCCATTATCCTTATTGGCTATGCTTCCGATATAGGACACATGGCCGGCGATGACATCACAAAGAAAACTCGTCCACGGGCCGTTGCCATCTTCGTCGTCGGCTTTTGGATCTTAGATGTTGCCAACAACATGCTCCAGGGACCATGTCGTGCCTTCCTTGGTGACTTGGCTGCCGGCGATCCCAAAAAAACGAGAACCGCCAACGCATTCTTCTCATTTTTCATGGCTGTGGGCAACGTCCTGGGCTATGCCGCAGGATCCTATAACGATCTCCACAAGATCTTCCCTTTCACTGAAACCGAGGCATGCAACATATTCTGTGCAAACCTAAAGAGTTGCTTCTTCTTCTCAATCGTTCTTCTTCTTGTTTTGTGCATTATCGTTCTGACTTGCGTGAACGACCCTAAGTTCACACCGGCACCAAAGGAGGTGAAGGTAGAAGATGGGAAGACACAAGTTTCGTGCTTCTACGGAGAGTGTTGTGTTGCATTCAAAGGACTGGAGAAGCCAATGTGGATGTTGATGCTAGTGACAGCTATCACATGGATTGCGTGGTTCCCTTATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTACGGCGGTGATGTGGGTCAGAAGGCATACGATGCTGGTGTGCATGCTGGTTCTTTGGGGCTCATGTTGAATTCAGTGGTGTTGGCTGTGGCGTCTTTGGGTGTAGAACCATTGGGTCGCTTGGTTGGTGGAGTCAAGTGGTTGTGGGCAATCGTTAATGTTATTCTCGCAGTTTGCTTAGCAATGACCGTGCTCATCACAAGAGTTACGTATAGTGTTCCCTTTGCTCTGGCCTCTATCTATTCTAACAACTCAGGTGCAGGACAAGGTGAACCAAAAGAAGCGATGATTGTATCAGCAATTAGTGGACCATGGGATGCTTTGTTTGGTGGTGGCAACTTGCCCGCATTCGTGTTGGGCGCTGCAGCGGCCGCCATAAGTGCCGTACTTGCAATTGTTCTACTTCCAAACCCCACAAAGGAAGATGAAGCAAAGATTTCCAGCCTCAACATGGACCATTTGAAGATGAAGAAAATGACATATAAGAAGAAGGAGACAAAACATCATACACAGCAAAGTGCCTCTCATACATGGGGTCACACAACTAATCATCCACCAGCTCCTCAAGTCCAATCCTCTCCCTCTCTTTCTGCCCCTCAAAGAAGAACATACAAACTAAAGCTACCTTTGACAAGCCAAAGCACATGCACTCCTACTCATAATCAGTCCCGAAATGCATTTGTTTTTCAATCAGCATGGACTCCTACACCTATTCAGTCCCCAGATGCATTTGTTTTTCATTCATCAGTTCAAGTTGACTATAAGTGA 1653 0.4791 MEEQVKQEPSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHVWASFIWLCGPISGLLVQPIVGYSSDHCQSSFGRRRPFILAGAIAVAIAIILIGYASDIGHMAGDDITKKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDPKKTRTANAFFSFFMAVGNVLGYAAGSYNDLHKIFPFTETEACNIFCANLKSCFFFSIVLLLVLCIIVLTCVNDPKFTPAPKEVKVEDGKTQVSCFYGECCVAFKGLEKPMWMLMLVTAITWIAWFPYVLFDTDWMGREVYGGDVGQKAYDAGVHAGSLGLMLNSVVLAVASLGVEPLGRLVGGVKWLWAIVNVILAVCLAMTVLITRVTYSVPFALASIYSNNSGAGQGEPKEAMIVSAISGPWDALFGGGNLPAFVLGAAAAAISAVLAIVLLPNPTKEDEAKISSLNMDHLKMKKMTYKKKETKHHTQQSASHTWGHTTNHPPAPQVQSSPSLSAPQRRTYKLKLPLTSQSTCTPTHNQSRNAFVFQSAWTPTPIQSPDAFVFHSSVQVDYK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00815 550 MobiDBLite consensus disorder prediction 467 493 - -
Vian8g00815 550 Pfam MFS/sugar transport protein 27 231 - -
Vian8g00815 550 NCBIfam sucrose/proton symporter 11 364 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vian8g00815 550 PANTHER SUGAR TRANSPORTER 11 429 - -
Vian8g00815 550 Gene3D MFS general substrate transporter like domains 13 238 IPR036259 -
Vian8g00815 550 MobiDBLite consensus disorder prediction 456 493 - -
Vian8g00815 550 SUPERFAMILY MFS general substrate transporter 11 436 IPR036259 -
Vian8g00815 550 FunFam Sucrose transporter SUC2 13 234 - -
Vian8g00815 550 CDD MFS_SLC45_SUC 15 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00815 Vian-Chr8 17775043 17784365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00815 1 439 Sucrose Transporter Gene Family AT1G22710 58.012 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00815 K15378 - gmx:100785899 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00815 8 17775043 17784365 Vian3g00786 3 8284520 8287093 PCT