Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00801 ATGGAGATGAGCAGCATTTGGATGAGACATGAAAATAAATATTCTTATATGACCATAGAGAGACGGAAGGACACTCTCAAAATTCCAAACCAGCCGTCCTTCCTTTGCTACTCCCTTCAACTCAGCATTCAAAGAGAGAATTCCTTTCTCCTACTCAAAATGGACGTGAGATTATCTTCTGCTCAGACTAAGAACTCCGAGGATGTTGTGGCCAGTCCTCCCCTTCAAATTGGGGGAACTGGAAAATCTTGTCATCAATGCCGGCAAAAGAAGGAGAATTTTGCTGCAACCTGCAAGAACTTAAAGAAAGGGAAGAATTGTCCGATTAAGTACTGCCACAAGTGCCTCTTGACTAGCATAGCAAAGATATATATGAAGATATGGGAACAGTGGAAGGGCATAGAGGAGCTCAAGGTCGCTGGTATCCCTCATGAGATACTATATCTTGTGAGAACAGGGTATGGAGAGAATGCTGAAGAGGTTGCACAGTTGGCTAATTGGACATGTCCGAAGTGTCGAGGCATTTGCAACTGTAGTCTTTGCCAAAAGCGACGAGGTGAACAGCCTACTGGTCCCCTGTATCGTAGTGCCAAGGAATCTGGCTTTAAGTCAGTTGCAGAAATGCTTGCAATGAAGAAGAATTTAGAAACATCAAATCCATTAAATGAGGGTAATCTGATAAAGGAGACTGAAGTATTTCTCTCAGGGGAACTTGGAAATGAAAATTTTTCAGATGCAAATGTCACTGTAGTTTGCACCAAAGATGATGGTGGTGAGAATTTTGGAATGAACTTAGAGAGCAAAGCAATTGCAGAGGAAATTCTTTTGCCACCGGGCATGGAGTTAAAAGAAATATTTGGCATCCAGTTACCACCCAAAGAGGTTGGGAATGCGTTGCAGATTTTAGAGTTTTGCAGAGTGTTTGGAAAGGCTCTTGATCTCAAGGAAGGAGAAGCTAAAACCATTTTTAAAGAATTGATCAGTGAAGAAAGTATGGATGAACATAACTCCTCACTGATTCAATTTCACATTAGATTGTTGGAATTGATTGTAAGCAATTCGAAAAAAGAGTCTCCATCCTTCTCAACCAAGAATGAAACTAATTCATGGTTGAAACATTTAGAGGATTTGATTATGCAATCATATCATCTAAATGATTTCCCTGTGGATTGGTTTCAAGAAGGCATCAGGGGATACTATAAATTGGATTTGTGTAAAAAGTTTAAACTGATGACTCTTCTTTGTGACGAAGCTTTGAACACTCAAAAACTAAGGAGTTATATTCAGGACGAAAATTCAAGGCATGCAAAAGTAGTGAAAGAAACAAAACTTAAGATTGCTGCCGCTAAAGAAAAGATAAAGTGTCTTGCACAAAAGTTGCAGAATGAGAATGCCAAAGTGTCCTCCATTCCAGGGGAGGAGCATGATGCTCATATAAAGATAAGAACTGAGGTTGACGAAGCACACATTGAGATGTTAAGGTTAAAGAGCACAGATATGAAGATACAAGATGAAACTGCTACTTTACCTGAAGAAAACTGGTTTGTTTACGGTCTTCCAGAGAAGGACGAGATTGATAAATATATATCTTCAAGGGCTAAAAGACTTAAGAGTCTCAATTCTCAAAAAAGTTTGTAG 1638 0.3938 MEMSSIWMRHENKYSYMTIERRKDTLKIPNQPSFLCYSLQLSIQRENSFLLLKMDVRLSSAQTKNSEDVVASPPLQIGGTGKSCHQCRQKKENFAATCKNLKKGKNCPIKYCHKCLLTSIAKIYMKIWEQWKGIEELKVAGIPHEILYLVRTGYGENAEEVAQLANWTCPKCRGICNCSLCQKRRGEQPTGPLYRSAKESGFKSVAEMLAMKKNLETSNPLNEGNLIKETEVFLSGELGNENFSDANVTVVCTKDDGGENFGMNLESKAIAEEILLPPGMELKEIFGIQLPPKEVGNALQILEFCRVFGKALDLKEGEAKTIFKELISEESMDEHNSSLIQFHIRLLELIVSNSKKESPSFSTKNETNSWLKHLEDLIMQSYHLNDFPVDWFQEGIRGYYKLDLCKKFKLMTLLCDEALNTQKLRSYIQDENSRHAKVVKETKLKIAAAKEKIKCLAQKLQNENAKVSSIPGEEHDAHIKIRTEVDEAHIEMLRLKSTDMKIQDETATLPEENWFVYGLPEKDEIDKYISSRAKRLKSLNSQKSL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00801 545 PANTHER OS05G0300700 PROTEIN 80 117 IPR040221 GO:0006355
Vian8g00801 545 ProSiteProfiles DDT domain profile. 292 356 IPR018501 -
Vian8g00801 545 Coils Coil 439 466 - -
Vian8g00801 545 SMART testlast3 292 356 IPR018501 -
Vian8g00801 545 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 80 118 IPR018866 -
Vian8g00801 545 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 152 209 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00801 Vian-Chr8 17018047 17023223 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vian8g00801 DDT 0.00012 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00801 - - vun:114181676 657.521