Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00800 ATGGACGTGATATTATCTTCTGCTCAGACTAAGAACTCCGAGGATGTTGTGGCCAGTCCTCCAATTCAAATTGGGGGAACTGGAAAATCTTGTCATCAATGCCGGCAAAAAAAGGAGAATTTTGCTGCAACCTGCAAGAATATAAAGAAATCGAAGAATTGTCCGATTAAGTACTGCCACAAGTGCCTCTTGACTAGTGTGATATGCTTAGCACTGCCGTTGAGGAAGAAATCTGAACTAGGTTACTGCTATATTCCTTCCTATCATATGCAGCATAGCAAAGATATATATGAAGCTATGGGAACAGTACAAGGGCATAGAGGAGCTCAAGGCCTTGTCACCGGTATCCCTCATGAGATACTATATCTTGTGAGAACAGGGTATGGGGAGAATGCTGAAGAGGTCGCGCAGTTGGCATATTGGACATGTCCGAAGTGTCGAGGCATTTGCAACTGTAGTCTTTGCCAAAAGCGACGAGGTGAACAGCCTACTGGTCCCCTATATCATAGTGCCAAGGAATCTGGCTTTAAGTCAGTTGCAGAAATGCTAGCAATGAAGAAGAATTTAGAAACATCAAATCCATTAAATGAGGGTAATCTGAAAAAGGAGCCTGAAGTATTTCTCTCAGGGGAACTTGGAAATGAATATTTTTCAGATGCAAATGTCACTGAAGTTTGCACCAAAGACGATAGTGGTGAGAATTTTGGAATGAACTTAGAGAGAGAAACAATTGCAGAGGAAATTCTTTTGCCACCTGGCATGGAGTTAAAAGAAATATTTGGCATCGAGTTACCACCCAAAGATGTTGGGAATGCATTGCAAATTTTAGAGTTTTGCAGAGTGTTTGGAAAGGCTCTTGATCTCAAGGAAGGAGAAGCTGAAGCCATTTTTAAAGAATTGATCAATGAAGAAATTATGGATGAACATAACTCTTCACTGATTCAATTTCACATTAAATTGTTGGGATTGATTGTAAGCAATTCGAAAAAAGAGTCTCCATCCTTCTCAACCAAGAATGAAACTAATTCATGGTTGAAACATTTAGAGGATTTGATTATGCAATCATATCACCTTCTAAATGATTTCCCTTTGGATTGGTTTCAAGAAGGCATCAGTGGATACTATAAATTGGATTTGTCTAAAAAGTTTAAACTGATGACTCTTCTTTGTGACGAAGTTTTGAACACTCAAAAACTAAGGAGTTATATTCAGGACGAAAATTCAAGGCATGCAAAAGTAGTGAAAGAAACAAAACTTAAGATTGCTGCAGCTAAGGAAAAGATAAAGTGTCTTGCACAAAAGTTGCAGAATGAGAATGCCAAAGTGTCCTCCATTCCAGGGGAGGAGCATGATGCTCATATAAAGATAAGAACTGAGGTTGACGAAGCACACATTGAGATGTTAAGGTTAAAGAGCACAGACAAAAGTGGATGTGATGCCACGAGAATCAATCCAGAGTTTGTGGACAACAATGGGATGACATTTTGGAAGTTACAAAGTTACAATGACGAATCGGTTCTTCTGCTGCAAGATATGAAGATACAAGATGAAACTGCTACTTTACCTGAAGAAAGCTGGTTTGTTTACGGTCTTCCAAAGAAGGACGAGATTGATAAATATATATCTTCAAGGGCTAAAAGACTTAAGAGTCTCAATTCTCAAAAAAGTTTGTAG 1674 0.3883 MDVILSSAQTKNSEDVVASPPIQIGGTGKSCHQCRQKKENFAATCKNIKKSKNCPIKYCHKCLLTSVICLALPLRKKSELGYCYIPSYHMQHSKDIYEAMGTVQGHRGAQGLVTGIPHEILYLVRTGYGENAEEVAQLAYWTCPKCRGICNCSLCQKRRGEQPTGPLYHSAKESGFKSVAEMLAMKKNLETSNPLNEGNLKKEPEVFLSGELGNEYFSDANVTEVCTKDDSGENFGMNLERETIAEEILLPPGMELKEIFGIELPPKDVGNALQILEFCRVFGKALDLKEGEAEAIFKELINEEIMDEHNSSLIQFHIKLLGLIVSNSKKESPSFSTKNETNSWLKHLEDLIMQSYHLLNDFPLDWFQEGISGYYKLDLSKKFKLMTLLCDEVLNTQKLRSYIQDENSRHAKVVKETKLKIAAAKEKIKCLAQKLQNENAKVSSIPGEEHDAHIKIRTEVDEAHIEMLRLKSTDKSGCDATRINPEFVDNNGMTFWKLQSYNDESVLLLQDMKIQDETATLPEESWFVYGLPKKDEIDKYISSRAKRLKSLNSQKSL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00800 557 Coils Coil 414 441 - -
Vian8g00800 557 ProSiteProfiles DDT domain profile. 266 330 IPR018501 -
Vian8g00800 557 PANTHER OS05G0300700 PROTEIN 27 64 IPR040221 GO:0006355
Vian8g00800 557 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 27 64 IPR018866 -
Vian8g00800 557 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 126 183 IPR018866 -
Vian8g00800 557 SMART testlast3 266 330 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00800 Vian-Chr8 16982017 16985958 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vian8g00800 DDT 0.00014 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00800 - - vun:114181676 649.047