Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00794 ATGGTTTTTAAAGAGTATGAACTATTGTTTGGTCTTTTAGCAAGCAACAGTCGACCTTTAGTCCTCTCCGAAGCCAAGATCGAGTCTGCTGCCGCGGTCCTCCTGCACTCCCTCGCCTACCTCCCGCACGCCGCCCAGCGCCGCCTCTGTTCCTACCACCTCATCCTCTGCCTCGGCTCTGGCGACCACGCCGTCGACTCTGGCGACCACGCCGTCGACTCTGGCGACCACGCCGTCGACTCTGGCGACCACGTCGTCGACTCTGGCGACCACGCCGTCGACTCCGCCCTTTCCGCTAACCTCGGCCTTCGCCTCGTCCATGTCGACACGTCGCGCGCCGAGGAGATCGCAGACACCGTCATGGCACTCTTCCTCGGCCTCCTCCGCCGCACGCACCTCGTCTCCCGCCACGCGCTCTCCGCCTCCAGCTGGCTCGGCTCCGTCCAGCCTCTCTGTCGTGGGATGCGCCGCTGTCGCGGCCTTGTTCTCAGCATCGTCGGAATCTCTAGCTTGGCTAGGTATTTGTCCACTTGCAGCTTGGCCTTCGAAATGAGCGTGCTCTATACTCAACCACCGAAGGAGATTCATGAGATTAAAGACTTCCTCCTCACTGCGAGGAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAAAGATGTGGTAAAGTTCAAGGTTCGCTGCTCCAAGTACATGTACACCCTCTATGTGTTTGACTCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTAGGAGAAGTAGGCAAAAGCTAGCTGATAATTCTAATCCACATTTGAAAAACATGGCACTTGATGCACTCATAATTGGTTACTCGACAGCAGAAAATTCGCCCTTCCTTCGGAAATTACCGAAGGCTTTAGCCCTTCGGTAA 900 0.5589 MVFKEYELLFGLLASNSRPLVLSEAKIESAAAVLLHSLAYLPHAAQRRLCSYHLILCLGSGDHAVDSGDHAVDSGDHAVDSGDHVVDSGDHAVDSALSANLGLRLVHVDTSRAEEIADTVMALFLGLLRRTHLVSRHALSASSWLGSVQPLCRGMRRCRGLVLSIVGISSLARYLSTCSLAFEMSVLYTQPPKEIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYMYTLYVFDSEKADKLKQSLPPGRRSRQKLADNSNPHLKNMALDALIIGYSTAENSPFLRKLPKALALR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00794 299 FunFam 60S ribosomal protein L38 191 259 - -
Vian8g00794 299 Pfam Ribosomal L38e protein family 192 254 IPR002675 GO:0003735|GO:0005840|GO:0006412
Vian8g00794 299 PANTHER C-TERMINAL BINDING PROTEIN AN-RELATED 22 68 IPR045015 GO:0000226
Vian8g00794 299 Gene3D - 192 258 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00794 Vian-Chr8 16740127 16743342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00794 192 253 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 90.323 7.89e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00794 - - var:108325348 328.176