LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian8g00790	ATGGTATTCTCTACAGCATATGGGAGAGGTGATGTACTTAGTTTGGGAAGCATCAAAGGGTTTTCAATCCAAGTCCTTACAGGGAGGTGGTTCATGATGTTTTCATCATTTATGTTGATGTCAGTGTCAGGAGCAAGCTACATGTTTAGCCTATTCTCACAAGATATCAAGTTAGTTCTTGGATATGATCAATCCACTCTCAATCTATTAAGCTTCTTCCAGGATTTGGGAGCTAACATAGGCATTCATGCAGGCCTAATCTATGAGGTCACACCACCTTGGTTTATCTTAACAATTGGTGGGATTCTCAACTTTGCTGGGTATTTTATGATTTGGCTTGTTGTCACCAGCAAAATTGCAAAGCCCCATGTGTGGCAGATGTGCTTCTACCTTTTCATTGGAGCCAATTCTCATTGTGCAACTAACACTGGAGCTCTTGTGACCAGTGTAAAGAACTTCCCTATCAGCAGAGGAGTAGTCTTAGGCCTTTTGACTGGGTATACAGGTTTAAGTGCAGTAATAATTACTCAGCTATACTATGCCTTGTATGGAGATGACTCCAAATTCCTCATTTTTCTCATGGCATGGCTACCGATTGCTGCAGTTTTTCTGTTTCTTCCAGTTATCAGAATCCACAAGAGTGTTCAACAGCCAAATGACACCAAAGTTTTATACAGGTTCCTCTATCTGACATTAGTCCTTGCTGGGTTCCTCATGTTTGTAACTTTAGTACAACAATTTTTCACTTTCTCTCAGTTTGAGTATCAGATTACTACCACTGTGATGCTTCTTCTGCTCATCCTTCCACTTTCTGTTGTTATTGTGGAAGAACACAAGATTTGGAAGAGTAAGCTTGAAAACATCAATAGGGAAGATAGTCAGAAGCTCCTGGAAAACTATCCAAATATAGCTACAGAAAATCCTTATCAAGAGACGTCTTCCCAGGCTCCCCAAGCAGAAATCTCCTTTTGGGAAAACATATTCAACCCCCCCGCAAGAGGTGAAGATCATACAATACTTCAAGCCACATTTAGCCTTGACATGGTGCTTCTCTTATTAACTACTATATGTTCACTTGGTAGCAACGTTACAATGATAAACAACTTGAGTCAAATTGGAATTTCATTAGGATATCCTTCTCATACCATAACCACATTTGTCTCTCTTACATCCATTTGGATCTATTTAGGTAAGGTGGTTCAAGGGGTTGTCTCAGAGTTTATCATACTCAAATATAGAGTCCCTAGGCCTCTCTTGCTCACATCATTGCTTTTGTTATCTTGTGTAGGTCATCTTTTAGTTGCCTTCAATGTCCCAAATGGTCTCTATGTAGCCTCAATTGTTATTGGGTTCTGCTATGGGGCTAATTGGCCATTAATGTATTCTGTTATATCTGAACTTTTTGGCCTCAAACATTATTCAACACTCTACAATTTAGGGTCACTGGTAGGTCCAATTGGGTCATACTTGCTCAGTGTGAGGGTTGTAGGGTATCTGTATGACAGGGAAGCCATGAGGCAAATGGAAGCTATGGGGAAAAAGAAAAGTCCAGGGGAGGAGCTGAACTGCAATGGGGAGGAGTGCTTCAAGTTAGCATTCATTATAATCACTGCAGTTAGCTTGTTTGGGGCACTTCTGTCACTCATTTTGGTCTTTAGGACCAAACGATTCTACAGAAGTGACCTATACAAGAAATACAAAGAAGTTAAAACTGATGAAACTGAAACAGGTGTGATACAACAGGATTGA	1749	0.4025	MVFSTAYGRGDVLSLGSIKGFSIQVLTGRWFMMFSSFMLMSVSGASYMFSLFSQDIKLVLGYDQSTLNLLSFFQDLGANIGIHAGLIYEVTPPWFILTIGGILNFAGYFMIWLVVTSKIAKPHVWQMCFYLFIGANSHCATNTGALVTSVKNFPISRGVVLGLLTGYTGLSAVIITQLYYALYGDDSKFLIFLMAWLPIAAVFLFLPVIRIHKSVQQPNDTKVLYRFLYLTLVLAGFLMFVTLVQQFFTFSQFEYQITTTVMLLLLILPLSVVIVEEHKIWKSKLENINREDSQKLLENYPNIATENPYQETSSQAPQAEISFWENIFNPPARGEDHTILQATFSLDMVLLLLTTICSLGSNVTMINNLSQIGISLGYPSHTITTFVSLTSIWIYLGKVVQGVVSEFIILKYRVPRPLLLTSLLLLSCVGHLLVAFNVPNGLYVASIVIGFCYGANWPLMYSVISELFGLKHYSTLYNLGSLVGPIGSYLLSVRVVGYLYDREAMRQMEAMGKKKSPGEELNCNGEECFKLAFIIITAVSLFGALLSLILVFRTKRFYRSDLYKKYKEVKTDETETGVIQQD	582

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian8g00790	582	CDD	MFS_Mch1p_like	28	544	-	-
	Vian8g00790	582	Gene3D	MFS general substrate transporter like domains	344	559	IPR036259	-
	Vian8g00790	582	Pfam	Nodulin-like	29	274	IPR010658	-
	Vian8g00790	582	SUPERFAMILY	MFS general substrate transporter	329	557	IPR036259	-
	Vian8g00790	582	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	30	563	-	-
	Vian8g00790	582	Pfam	Major Facilitator Superfamily	351	555	IPR011701	GO:0022857\|GO:0055085
	Vian8g00790	582	SUPERFAMILY	MFS general substrate transporter	31	268	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian8g00790	Vian-Chr8	16535587	16537335	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian8g00790	16	568	Nodulin-like Gene Family	AT2G39210	57.885	0.0	685