Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00760 ATGTACCATCAGCAGCAGCAGCAGATAGCAGCAAGAAACTTGCATGCTTTAAGGATGCACAGCCACACTGAGAGGCATATGATGATGCAAGGAGGCAATGGGGCTTGTGATTCAGGACTTGTTCTTTCAACCGATGCTAAGCCTAGACTAAAATGGACACCAGATCTTCATGAACGGTTCATAGAAGCAGTCAATCAACTTGGAGGAGCAGACAAAGCTACACCAAAAACAGTTTTGAAACTGATGGGGATTCCTGGACTTACTCTCTACCACTTAAAGAGTCATCTACAGAAGTACAGAATCAGTAAAAATATGCATGGACAAACCAATACTGGCAACAATAAAATTGCAACACTAACAATAATAGATCCTCCATCCAGAAATTCAGAAATTAATGATGCCTTACAGATGCAAATCGAAGTACAAAGAAGACTGCATGAGCAGCTTGAGGTACAGCGACACTTGCAGCTAAGGATAGAGGCACAAGGGAAGTACCTTCAGGCAGTGTTGGAAAAGGCACAAGAAACACTAGGAAGACAAAATTTAGGTGCAGAGGGTGTTGAAGCTGCCAAAGTTCAATTATCTGAACTGGCATCAAGAGTATCCTCTCAAAGTCTTGACACTAAATTTTCAGAACTGAAAGAGCTACAGGTTCTGTGGCCTCAGCAAACACAAGAGGGCCAAGCCACTGAGTGTTCAATGGGGAGTTTCTTGACATATAGTGAGGATTCTCAAAGAGACAGAGAAACACATAACATGAGCCTGAATCTGATAGCCTTCAATGGCCCTCCATTTTCAGTTTCAAAAGACTGTGTGGAAGAGTCAATGCATTTGAAGCCTGATCTCACATTGAGTGAAGATGTGAAGCAGAATATGATGTTTCTTTCCTCATCAAGTGATGGTAAAGTAGTGAAGGGAGATTTCTTACAAGAAGGGCCTTCAAGCCTCTTATCCATGAATGTTGGAGTTCTAGAAGAGGAAAAATTTGGGAGAACAACTCTTTCAAAGGAAGAAGGGTGGAAGGTAAGAAACAGCACTGAATCTGGGAGAATGGCAGTTAAATTGAACCATGAGAAGATTTCTCCAGATTATAGACTTCCAAACTTTGAAGTGAAACTGGACCTGAATTCCCATGATGATAATGATGCTTCTTCCCACTGCCAACAATTTGATTTGAATGGTTTCAGCTGGAATTGCTAG 1200 0.4158 MYHQQQQQIAARNLHALRMHSHTERHMMMQGGNGACDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISKNMHGQTNTGNNKIATLTIIDPPSRNSEINDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGAEGVEAAKVQLSELASRVSSQSLDTKFSELKELQVLWPQQTQEGQATECSMGSFLTYSEDSQRDRETHNMSLNLIAFNGPPFSVSKDCVEESMHLKPDLTLSEDVKQNMMFLSSSSDGKVVKGDFLQEGPSSLLSMNVGVLEEEKFGRTTLSKEEGWKVRNSTESGRMAVKLNHEKISPDYRLPNFEVKLDLNSHDDNDASSHCQQFDLNGFSWNC 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00760 399 FunFam Myb family transcription factor 46 104 - -
Vian8g00760 399 Pfam MYB-CC type transfactor, LHEQLE motif 130 176 IPR025756 -
Vian8g00760 399 Pfam Myb-like DNA-binding domain 49 100 IPR001005 -
Vian8g00760 399 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 21 254 IPR044848 GO:0003700
Vian8g00760 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Vian8g00760 399 Gene3D - 46 104 - -
Vian8g00760 399 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Vian8g00760 399 Coils Coil 132 152 - -
Vian8g00760 399 NCBIfam myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00760 Vian-Chr8 15537760 15540345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00760 79 398 G2-like Transcription Factor Family AT3G04030 45.428 3.88e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian8g00760 Myb_DNA-binding 4.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00760 - - gmx:100786282 677.937