Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00757 ATGATGGAAGAACCTGTTGTGGTTAACAAAGGAGATGAGCCTTTGGATTTGCCTCCAGGTTTCAGATTCCACCCCACAGATGAAGAGATCATCACATGTTACCTCACAGAGAAAGTGCTGGATAGAGCCTTCAGTGCAACTGCTATTGGAGAAGCTGATTTGAACAAGTGTGAGCCTTGGGACTTGCCCAAGAAAGCAAAGATGGGGGAGAAAGATTGGTACTTCTTCTGCCAAAAGGATAGGAAGTATCCAACAGGGTTGAGAACCAATAGAGCAACACAATCTGGGTATTGGAAGGCCACTGGGAAGGACAAAGAGATTTTCAAAGGGAAGAACAATCTTGTGGGGATGAAGAAGACCCTTGTGTTCTATAGAGGAAGAGCCCCAAAGGGAGAGAAAACAAATTGGGTTATGCACGAATTCAGATTGGAAGGAAAATTCGCATGTTACAACCTTCCCAAGGCTGCAAAGGATGAATGGGTTGTGTGCAAGGTTTTCCACAAGAGCAACACTGATGTTAACAAAAGGGTACTCCCAATTAACCCTGGCATTGGCCTTCTGAGAATGAACTCAGTAGGAGAAGATCTATTTGATTTCTCTTCACTTCCACCTCTTGTGGATCCTCTCTTTGATCAACCCTCACACAAAAAACACATTGACAATGATTTCAAGGGTACTAGTAATAGTACTAACACTTACACACCTTCATCAGCTTCATCATCAGCAGCTGCTGAACCACCCTATTACCTTCCCAATTTCATCAACAACAATCATCACATGCAGATGAAGATGATGATGACGATGAAGCCTGAAGAACACAGAATCTGTGAGACACCACTCACCAACGTTAACTATGCCTCCACCAGCCAAGGGAATCTCAACTCTATCAACAACCCAATGGGAATTGGTACAAGCAATCATAACCCCCTTCAAAACACAACCTCACCCTTCAACATGTTCCAAGATTACTATATGCACCAAGGCAACAACAGTTTCCAGCAGTGCAAGAGGGAGCAATTCTCCAACACTGTGGTCAGTGCCTCTCAAGACACGTGCCTCAGTAACGACAGAAACACTGACACTTCCTCGGTGGTGTCAAAGCAAGACAACATGGGAAGGAACAAGGCATTGTACGAGGATCTTGATCAAGCTCCTTCATCAGTTGCTACCCTCTCAGATTTGGATTGCCTCTGGGATGATTACTGA 1206 0.4444 MMEEPVVVNKGDEPLDLPPGFRFHPTDEEIITCYLTEKVLDRAFSATAIGEADLNKCEPWDLPKKAKMGEKDWYFFCQKDRKYPTGLRTNRATQSGYWKATGKDKEIFKGKNNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFACYNLPKAAKDEWVVCKVFHKSNTDVNKRVLPINPGIGLLRMNSVGEDLFDFSSLPPLVDPLFDQPSHKKHIDNDFKGTSNSTNTYTPSSASSSAAAEPPYYLPNFINNNHHMQMKMMMTMKPEEHRICETPLTNVNYASTSQGNLNSINNPMGIGTSNHNPLQNTTSPFNMFQDYYMHQGNNSFQQCKREQFSNTVVSASQDTCLSNDRNTDTSSVVSKQDNMGRNKALYEDLDQAPSSVATLSDLDCLWDDY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00757 401 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Vian8g00757 401 MobiDBLite consensus disorder prediction 224 243 - -
Vian8g00757 401 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Vian8g00757 401 FunFam NAC domain-containing protein 100-like 26 172 - -
Vian8g00757 401 MobiDBLite consensus disorder prediction 217 243 - -
Vian8g00757 401 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Vian8g00757 401 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Vian8g00757 401 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00757 Vian-Chr8 15466671 15468271 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00757 1 216 NAC Transcription Factor Family AT5G18270 71.300 2.04e-113 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian8g00757 NAM 2.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00757 - - gmx:100813376 578.17