Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00753 ATGGGAACCCCACAATCCAACAACTTGCCCCCAGGATTTAGGTTCCACCCTACAGATGAAGAGCTCATTCTTCACTACCTTAGGAAAAGGGTAGCCTCCATTCCTTTGCCAGTTTCTATCATTGCTGAGGTTGATATCTACAAGTGTGATCCATGGGAGCTACCAGCTAAGGCTGCGTTTGGGGAGAAAGAGTGGTACTTTTTCAGTCCGAGAGACCGGAAGTACCCAAATGGAGCTCGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCAACAGGCACTGATAAGAACATAGTTGCATCATTGGGTGGAGGAGTGAGAGAACATTTTGGTGTGAAGAAGGCTTTGGTGTTCTACAAAGGAAAACCCCCAAAGGGTGTCAAGACCAATTGGATCATGCATGAATATCGCCTTGTTGACACCAATAAACCTGTTAGGATCAAAGACACTTCCATGAGATTGGATGACTGGGTTCTATGCCGGATATACAAGAAGTCGAAACACAGTCTAAGTTCAATCACAGAGGCAGCACAAACAGTGGAAATGAAAGAGCAAGAAGAAGCAGAAGATCGAGAAGAGCAAATGAAAGAAGGTTTTTCTTTTTCAGCAATCTCCAACACTGCAACACCTCTTCTCCCTCCTCCACAAGCCACACTCATATCTCAAAAATCTCTATCCTTCTCCAACCTCTTGGATGCAACAGACTTTTCCATGCTCAGCACCATCTTATCAGAGAACCATAACTCCAGTAATTACCCAAACACAACTGAACCATTGTTCAACTCTGAGAATCTGGATCATGAAATCCCCCAGAATTTCTACAACAACAACACTGATATTAACAATAGTACCTGTTTCATTCAGAAGAACCCTTCGGTGATTGCCCACATGGATGAGAACATGATGTACCCTCCAAAGAAACACCATAGTTCCTCTTGCAATTTTCCTAACACCACCCTCCAAAACCAGAACCCCCAACGGAACTTCATCTTCAAGCAGCCTCACATGAATCACCAGCTACTTCCGGGTCCCCAATATCTTCAATTTCAGTGA 1056 0.446 MGTPQSNNLPPGFRFHPTDEELILHYLRKRVASIPLPVSIIAEVDIYKCDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLGGGVREHFGVKKALVFYKGKPPKGVKTNWIMHEYRLVDTNKPVRIKDTSMRLDDWVLCRIYKKSKHSLSSITEAAQTVEMKEQEEAEDREEQMKEGFSFSAISNTATPLLPPPQATLISQKSLSFSNLLDATDFSMLSTILSENHNSSNYPNTTEPLFNSENLDHEIPQNFYNNNTDINNSTCFIQKNPSVIAHMDENMMYPPKKHHSSSCNFPNTTLQNQNPQRNFIFKQPHMNHQLLPGPQYLQFQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00753 351 Pfam No apical meristem (NAM) protein 10 139 IPR003441 GO:0003677|GO:0006355
Vian8g00753 351 FunFam NAC transcription factor 56 18 171 - -
Vian8g00753 351 PANTHER NAC TRANSCRIPTION FACTOR 56 9 220 - -
Vian8g00753 351 Gene3D NAC domain 18 171 IPR036093 GO:0003677|GO:0006355
Vian8g00753 351 SUPERFAMILY NAC domain 6 166 IPR036093 GO:0003677|GO:0006355
Vian8g00753 351 ProSiteProfiles NAC domain profile. 9 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00753 Vian-Chr8 15329183 15331201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00753 7 272 NAC Transcription Factor Family AT3G04070 58.845 3.08e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian8g00753 NAM 8.1e-40 No_clan